Gene Franean1_5317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5317 
Symbol 
ID5673651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6405012 
End bp6405431 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content72% 
IMG OID641244174 
Productglobin 
Protein accessionYP_001509581 
Protein GI158317073 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0702045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.216575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCAGA ATGGACCCGT GAACCAACCG TCACCCGCGC GACCACGCGC AGACTTCTAC 
GAGGCCGTCG GCGGCGAGGC GACGTTCCGC GCGTTGGTGG CCAGGTTCTA CGAGGGGGTG
GCCAGCGACC CGGTGCTCCG GCCGCTCTAC CCCGACGAGG ATCTGGCGGC GGCCGAGGAG
CGGCTGCGGC TGTTCCTCAT CCAGTACTGG GGCGGGCCGA CGACGTACAG CGAGCAGCGC
GGCCATCCCC GGCTGCGGAT GCGGCACGTG CCGTTCGCGA TCGGCCCGGC CGAGCGGGAC
GCCTGGCTGC GCATCATGGA ATCCGCGGTC GACAGCCTCG GCCTCGCCCC GGAACACCGC
GCCCAGCTCT GGGACTACCT GCTGATGGCC GCGAACTCCC TACAGAACCG CCCGGGCTGA
 
Protein sequence
MAQNGPVNQP SPARPRADFY EAVGGEATFR ALVARFYEGV ASDPVLRPLY PDEDLAAAEE 
RLRLFLIQYW GGPTTYSEQR GHPRLRMRHV PFAIGPAERD AWLRIMESAV DSLGLAPEHR
AQLWDYLLMA ANSLQNRPG