| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5314 |
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| Symbol | |
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| ID | 5673648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6398904 |
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| End bp | 6400625 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641244171 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001509578 |
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| Protein GI | 158317070 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.492439 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCATAC TCGTCACCGG TGCGACCGGG TATATCGGTG GTCGGCTGGC ACCCCGCCTG
CTCGGCCAGG GCCATCATGT CCGCTGCATG ACCCGTGATC CGGCGCGGCT GTCCGACGTC
GGCTGGGCCC GGCATCCCGA CATCGAGGTG GTCCGTGCCG ACGCCCTCGG CCCGGAGTCG
CTGCGCGCGG CGATGGAGGA TGTCGACGTC GCCTACTACC TGATCCACTC GATCGACACC
GGCGGCGACT TCTCGGCCGT GGACCGCCGG GCGGCCGCGG CGTTCGCGCG GGCGGCGCGG
GCCGCCGGCG TCCGGCGGAT CATCTACCTG GGTGGGCTGA GCCCGGCCAC CGGCATCGGC
ATGTCGGCGC ACCTGGCGTC CCGGCAGGAG GTCGCGCGGA TCCTGCTCGA CTCCGGGGTG
CCCACGGTCG TGCTGCGCGC CGCGATCATC ATCGGCAGCG GCAGCGCGTC GTTCGAGATG
CTGCGCCACC TCACCGAGCG GCTGCCGGTG ATGCTCACCC CACGCTGGGT GCGGACCCGC
ATCCAGCCGA TCGCCGTCCG GGACGTCCTG CACTACCTCA TCGGATGTCT CCAGCTGCCG
GCCGAGATCA ACCGCTCGTT CGACATCGGC GGGCCGGACG TCCTGACCTA CGCCGACATG
ATGCAGCGTT TCGCGGCGGT CGAGGGCCTG CGTCGCCGAG TGATCATCCG TGTGCCGGTG
CTCTCCCCCG GCCTGTCGTC GCTGTGGGTC GGGGTGGTGA CGCCGGTCCC CCGGGCGATC
GCGCGGCCGC TGGTCCGCTC GCTGCGGACG GAGGTGGTCG TCGGCGAGCA CGACATCGCG
CGGTGGGTGC CGGACCCGCC CGAGGGGCTG CTGCCGTTCG AGACCGCGGT CGCCTACGCG
CTGGCGCGGG TGCGCGACCG GACAGTGGAG ACCCGGTGGT CGACTGCGGT CTGGCCGGGC
AGCCCGCTCG CCGCGCCGTT CCCCGAGGTC GCCGCATACC TCTCCGCCGA CCGGGCCGGC
CGCCGCGGGC ACCGCCCGGT TGCGGCCGGT GTCCGGACCG CGGACGCCAG CCGGACGGCG
GCGGACGGCG GCTCGCCGGA CAACGCCCCG TCCAACGGAA TCCTGCCCGG CGGCGCTCCG
CCGGGCGAAC CCGTCCCGAC CGATCCGGCC TGGGCCGGGA GCTCGCTCTA CAGCGACGAG
CGGTCGAAGG CGGTGGCCGC GCCCGCGGAC CGTCTGTGGC AGGTCATCGA GGGGATCGGC
GGCGAGAACG GCTGGTACAG CTGGCCGCTG GCGTGGTCGG CGCGCGGGTG GCTCGACACG
CTCGTCGGCG GGGTCGGGCA CCGCCGCGGC CGGCGCGACC CAGCCCACCT GCACACCGGG
GAGGCGATCG ACCTGTGGCG GGTCGAGGAG CTGGTCCCCG GACGGCTGTT GCGCCTGCGC
GCCGAGATGA GGCTGCCCGG CCACGCCTGG CTCGAGCTGC GCGTCGGGCC AGGCGGCCCC
GACGGCAGGA CGGTCTACCG GCAGCGGGCG CTGTTCCTGC CGCGCGGGCT GCCGGGCCAC
CTCTACTGGC GGGCCGTCAG CCCGTTCCAC GCCGTGGTCT TCGGCGGAAT GCTGCGCACC
ATCGTCCGCC GGGCCGAATC CGCCCCGGCC GCGGCCGCGC CGGCTGTGGC GGCCCCGACG
GAGTCGACTT CGATCGAGCC GACCACGCCG GCCGGCCGGT GA
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| Protein sequence | MRILVTGATG YIGGRLAPRL LGQGHHVRCM TRDPARLSDV GWARHPDIEV VRADALGPES
LRAAMEDVDV AYYLIHSIDT GGDFSAVDRR AAAAFARAAR AAGVRRIIYL GGLSPATGIG
MSAHLASRQE VARILLDSGV PTVVLRAAII IGSGSASFEM LRHLTERLPV MLTPRWVRTR
IQPIAVRDVL HYLIGCLQLP AEINRSFDIG GPDVLTYADM MQRFAAVEGL RRRVIIRVPV
LSPGLSSLWV GVVTPVPRAI ARPLVRSLRT EVVVGEHDIA RWVPDPPEGL LPFETAVAYA
LARVRDRTVE TRWSTAVWPG SPLAAPFPEV AAYLSADRAG RRGHRPVAAG VRTADASRTA
ADGGSPDNAP SNGILPGGAP PGEPVPTDPA WAGSSLYSDE RSKAVAAPAD RLWQVIEGIG
GENGWYSWPL AWSARGWLDT LVGGVGHRRG RRDPAHLHTG EAIDLWRVEE LVPGRLLRLR
AEMRLPGHAW LELRVGPGGP DGRTVYRQRA LFLPRGLPGH LYWRAVSPFH AVVFGGMLRT
IVRRAESAPA AAAPAVAAPT ESTSIEPTTP AGR
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