| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5312 |
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| Symbol | |
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| ID | 5673646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6396499 |
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| End bp | 6397863 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641244169 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001509576 |
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| Protein GI | 158317068 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.262454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.518656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCATCT CACGTGTCCC GTTTGGTGCT GTCCCGTTCG GTGGCGTGCC CGCCGAACCG
GTCGCGGCCG GGCTGCCCCC GGCTGTCATG GGTGCGGAGC CGTCCCTGCT GGCTCAGCCC
GTGATCCCGA TGCTCGGCGC GATCCTGTCG CCCACCGCCG CACCGACGAC CGCGGCGACG
GTCTCGCCCA GCCCCATACC CTCGGTGTCG ATCTCACCTG GTCCGACGAC GGATCCGTTC
GTCTCGATCG AGGGTGTCGC CAACGCGCTG CGGGACGCCT GCGGCACGGA CCCCGGCCTC
ATGTGCCGCA CCGTGTACGA CCTCACGCAC AGTAACTATC TTGCGTCCGG TGCCGAGGTG
TTCCTCGGTA CGCCGATCAA GATTTCGCTG ATTCTGCTGC TCGCGATGGT GATCCGCACG
CTGCTGCACC GGTTCATCCG GCGGACCACC GAACGGGCCG CCTCGGGGCG CAGCACCGGC
ATGCTGCGCG GGCTGCGGTC GAACACCTTG CTGGGCGCAT TCGGTGATCC GACCGTTCTG
CTCGAGCGGC GGCGCCAGCG CGCCGGAACC GTCGGATCGC TGCTGCGCAG CGTGACGTCA
ATCTTTGTGT TCGGGCTGGC TTTCCTCACG ATCCTCGGCG AGCTCGGCCT GAATCTAGCC
CCGATCGTGG CCAGCGCCGG AGTGCTCGGC ATCGCCGTCG GTTTCGGTGC GCAGAACCTC
GTGCGCGACT TCCTGTCGGG CATGTTCATG CTGCTGGAGG ACCAGTACGG CGTCGGTGAC
GTGATCGACG TCGGCCCGGT CTCGGGCACC GTCGAGGCGG TGAGCCTGCG GATGACCCGA
TTGCGCGACG TCGAGGGGAC GGTCTGGTAC GTCCGCAACG GCGAGATAAC CCGGGTCGGG
AACAAGAGCC AGCAGTGGGC ACGCACCGTT CTCGACGTCC CGCTCGATTA CGACACCGAG
GTCGCCGCCG CGAAACGGGT GCTCGTCCGG ACGGCCGACA AGCTGTGGAA GGACGAGGCC
TGGTCCGGCC TGATCCTCGC CGAGCCGGAG GTCTGGGGCA TGGAGACCAT GACCGCGGAC
GGCTACACGC TGCGGATCGC CATCAAGACC CAGCCGCTCA AGCAGTGGGA CGTCGCCCGC
GAGCTGCGGG AGCGGGTCCG GGCGTCGCTC GGCCGGGCCG GGATCGAGCT CGGCACCGTC
CAGCGCAGCG AGGTCGTGGT CGTCGACGAC GATGACGACG ACAAGCCCGC CGAGGAGGAG
GAGACGCCGG GCGGCACCGG CGGCTCGCCG GGCCAGGGCG CGGACGACGT GCCGACACCC
AGGATCGATC CGCCCGCGCC GGCCCGTTCC GGGCATAGCG CCTGA
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| Protein sequence | MSISRVPFGA VPFGGVPAEP VAAGLPPAVM GAEPSLLAQP VIPMLGAILS PTAAPTTAAT
VSPSPIPSVS ISPGPTTDPF VSIEGVANAL RDACGTDPGL MCRTVYDLTH SNYLASGAEV
FLGTPIKISL ILLLAMVIRT LLHRFIRRTT ERAASGRSTG MLRGLRSNTL LGAFGDPTVL
LERRRQRAGT VGSLLRSVTS IFVFGLAFLT ILGELGLNLA PIVASAGVLG IAVGFGAQNL
VRDFLSGMFM LLEDQYGVGD VIDVGPVSGT VEAVSLRMTR LRDVEGTVWY VRNGEITRVG
NKSQQWARTV LDVPLDYDTE VAAAKRVLVR TADKLWKDEA WSGLILAEPE VWGMETMTAD
GYTLRIAIKT QPLKQWDVAR ELRERVRASL GRAGIELGTV QRSEVVVVDD DDDDKPAEEE
ETPGGTGGSP GQGADDVPTP RIDPPAPARS GHSA
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