Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5310 |
Symbol | |
ID | 5673644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6393672 |
End bp | 6395699 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641244167 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001509574 |
Protein GI | 158317066 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.223849 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCCGC CGCCGACCGG GTGTGAGCCC GCTGCCGCTG TCAGTGCCGA CGACGCCGAC GAAACTGGCC AGGTCGAAGA GGCCGGTAAG GCCGGTAAGG CCGACAACGC CGACGAGGTC GGTGTGACCG GGCCGGAGCA GCCGGCGAAC ACGCTGGTCG AGGGCCGGCG GGTGGGGGGT CCGTCGTCCC AGCCGGCGGC GTCGCGCTGG CCGAGCCGGC TCCCGCGGCT GACGCTGCGG GCCCGGATGG CGCTGCTCGC CGGGGTGGCC GTCGCCGCCG CGGTCGCCGT CGTGGTCAGC GTCGCCCTCG GCGTCACCCG GATCGTGCTG AACCAGGCGA TCGACGACCA GCTCCTGGAA CAGGCCAAGG CGTCGGCCGG CAACCTGCAG GCGAGCCAGA TCAGCGTCCG GGCCCTGAAC TTCGGCATGG AGCTGCAGTT CCTCGACGGC GACGGAGTGC CCCTGGAGAG CGCCTTCCCG TCGCTGGAGA CCTTCGCGAT CCCCGTCGAC GCGGCCGACG CCGAGGTCGC GCGGGGCCTG CGTGGCAAGA ACCTGCGCAC CGTCACGGTC GAGGGCCAGC GGTACCGGGT GGCCACCGTC CCGCTGCGCT ATCCGCCGCC ACTCACCGGC ACCGGGGCCC TGCAGCTGGC CCGGTCCACC TCCGACGTGG ATCGCACGCT GCGCGATCTC GGGCTGGTGC TGTTCATCGT CGGGCTGGTC GGCGTGGTCG GCTCGGTGAT CGCCGGCCGC CTCGTCGCCC GTGCCTCGCT GAAACCGGTG GACGCCGCGG CGGCCGCGGC GGAGGAGGTG GCGCGTACCC AGGACCTCTC CGCCCTGATC CCGGTCACCG GCTCGGACGA GATCGCCCGG CTGGCTACCA GCCTCAACAG CATGCTGCGG GCGCTGGAGG CATCCCGGCT GCGGCAACGC CAGCTCGTCG ACGACGCCGC CCACGAGCTG CGCACGCCGC TGACCAGCCT GCGCACCAAC ATCGAGCTCC TGATGCGAGC GGAGACGACT CCGAACCGGG CGCTGCCCGC GGCGGACCGT GACGCGCTGC TGCGCGACGT CGACGCCCAG ATGCGCGAGC TGACCGCGCT GGTCAACGAG CTGATCGAGC TGGCCCGCGA CGAGGTGCCC ACGGAGGAGA TCGAGCGGCT CGACCTCGCC CAGGTCGTGC GGGCCGCCGC GGACCGGGCC CGGCGCCGGG CGAACACCAA GGGCATCCGG ATCGAGGTGA GCGTCGAGCC GTCCCTGGTG GACGGGCGGC CGAGCCTGCT GGAGCGGGCG GTGACCAACC TGCTGGACAA CGCGGTGAAG TTCAGCCCGC CGTCCTCGAC CGTGCGGGTG GTCAGCCGGG CCGGCGAGGT CACCGTCGCC GACGAGGGCC CGGGCATCGC GCCGGCCGAC CGGGCCCGCG TCTTCGAGCG CTTCTACCGG GCCACGGCGG CGCGCAGCCT GCCCGGCTCC GGCCTTGGCC TGGCGATCGT CGCGGACGCC GCGGCGATGC ACGGCGGGAC GGCCGAGGCC GCCGAGTCGC CGTCCGGCGG CGCGCTGCTG CGGATGACAT TGCCCTGCGT GGCGGCCTGG GAGCGGGGGG TTCCCTGGGA CGGCGACGAT CCCGTCGGGT ACGGCGGGTT CGTCTCCGAC GGCGGGACCG CCGGCGCGAA CGGCTTCCTT TCGGTAGATG GCCCTCCTCC GATGAGCGGC CCTCTGTCCA TGGGCGGCTT CGCTCCGGCG GGCGGAGCCG GGCCCGTGGG CGTCTCCCCG GCGCGCTCGG GGCCCGCGGC TGCGGACGCG GACTCGCCGT GGCGGCGGCC GGCCGGCGGC TCCGCAGCGG CCGCCGAAGC GGAGCAGGCG GTGGCCGAGA GAGCGGAGAA GGCAGAACAG ACGGCAGAGC GGGCGGCTGG GCAGAAGGCG GGCGGGGCAG GCACGGGCGG TCCGGCCACG GCGCCCGGCG TTGGCGCGGA GCGGCCCGGG GGGCGTTCGA CGGTCCGCCC GGGGCAGCGG GCAGGATCAG GTCCGTGA
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Protein sequence | MNPPPTGCEP AAAVSADDAD ETGQVEEAGK AGKADNADEV GVTGPEQPAN TLVEGRRVGG PSSQPAASRW PSRLPRLTLR ARMALLAGVA VAAAVAVVVS VALGVTRIVL NQAIDDQLLE QAKASAGNLQ ASQISVRALN FGMELQFLDG DGVPLESAFP SLETFAIPVD AADAEVARGL RGKNLRTVTV EGQRYRVATV PLRYPPPLTG TGALQLARST SDVDRTLRDL GLVLFIVGLV GVVGSVIAGR LVARASLKPV DAAAAAAEEV ARTQDLSALI PVTGSDEIAR LATSLNSMLR ALEASRLRQR QLVDDAAHEL RTPLTSLRTN IELLMRAETT PNRALPAADR DALLRDVDAQ MRELTALVNE LIELARDEVP TEEIERLDLA QVVRAAADRA RRRANTKGIR IEVSVEPSLV DGRPSLLERA VTNLLDNAVK FSPPSSTVRV VSRAGEVTVA DEGPGIAPAD RARVFERFYR ATAARSLPGS GLGLAIVADA AAMHGGTAEA AESPSGGALL RMTLPCVAAW ERGVPWDGDD PVGYGGFVSD GGTAGANGFL SVDGPPPMSG PLSMGGFAPA GGAGPVGVSP ARSGPAAADA DSPWRRPAGG SAAAAEAEQA VAERAEKAEQ TAERAAGQKA GGAGTGGPAT APGVGAERPG GRSTVRPGQR AGSGP
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