| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5309 |
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| Symbol | |
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| ID | 5673643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6391333 |
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| End bp | 6393675 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641244166 |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_001509573 |
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| Protein GI | 158317065 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.242878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACATCCG CGCCCGAGCG CCCCGACCAG CCCGCCGCGC CCCCCGCCGC TACCGCGCCG
CCTACCACTG CGGCGCCGTC AGCCGCCGCG CCGTCAGCCG GCGGCGCGGT CGGAGCCGGT
GGGCAGCAGG GCCCGGCGTC GGTCTGGTCC GGGCTCGGTG ACCTCAAGGC CCTCGCCGCC
GAGTTCGGGG TGGCCACGTC CTACGACGGG CAGGACGGCA CGCCGGTCAC GGTGCAGCCG
AGGGCCGTCC GGGCGGCGCT GGGCCTGCTC GGCGTCGACC CGTCGGACCC GGCCGTCGCG
CTCGCCGGGG CACGCGAGGC GCGTCGGCGG CGCCCGCTGC CCCCGTGTGC GGTCGTCCGG
GCGCAGGCCC CCGCGCCGGT CGCCGTGCAC GTGCCGGATG CCGCCGCGGA CGCCGTCACC
GCCGAGGCCG TGCTGGCCGG CGGGGAGAGC GTGCCGCTGT CGGTCGGGCT GCGCGGCGCT
GTCGGGGAGG TCGACGGCCA TGCCGTCCGC GCGGGCACGG TGGACCTGCC GTCCGGCCTG
CCGCTCGGGG ATCACCGCCT GCGGCTGAGC TTCGGCGGGA GCACCACCGA GTGCCCGCTG
ATCGTCGTCC CGGAGCGCGT GCCCGACTTC GCGGCCGCCC CGAGCCCGGC CGAGGCCACC
GGGCGGGCCT GGGGCTGGAT GATCCAGCTG TACGCGCTCA CCTCCGCGGG ATCGTGGGGG
ATGGGCGACT ACGCCGACCT CGCCACCCTC GCCGAGTGGT CCGCGCGTGA CGGCGCCGAC
GTTCTGCTGG TGAACCCGCT GCACGCGGTG GCGCCGACCT TTCCGGTCGA GCCGTCGCCG
TACTCGCCGG CGAGCCGCCG CTTCGTCTCA CCGCTCTACC TGCGGCCCGA GCTGACCCCG
GAGTACCGGC ACGCCTCCGA GACGGTGCGG GCGGAGGTCG ACCGGCTGGC GGGAGTCGCC
CGCCGGGAGG GGATCAGGGA CGGCCTGATC GACCGGGACG CGGTGTGGCG GGCCAAGCTC
GCCGCCGTCG AGCTGCTGTT CACCTCGTCC GGCGGCGGGA CGGGCGACGG GCCGGCCGGT
GGGCAGGAGG CCGATGGCGC GCTGCGCGAC TTCGCGCTCT GGTGCGCGCT CGCCGAGCGG
CACGGCCGGG ACTGGCGCAC CTGGCCGGAG GACCTGCGCG ATCCCGCCGG GCCGGCGGTC
GACGCCGCGC GCGCCGAGCT GGCGGAGCGC GTCGCGTTCC ATGTCTGGCT GCAGCGGCGG
TGCGACGACC AGCTCGGCGC GGCGCAGGCC GCCGCCAGGA CGGCGGGGAT GCGGGTCGGC
ATCGTCCACG ATCTCGCTGT CGGGGTCGAT CCGGGCGGCG CGGACGCCTG GGCGATGCGC
GGCGTGCTGG CCACCGGGGC CTCCGTCGGC GCCCCGCCGG ACGGCTTCAA CCAGCAGGGC
CAGGACTGGG GCCTCCCGCC GTGGCGGCCC GACGTCCTCG CGGAGAGCGG GTATGCCCCG
TTCCGGGCGA TGGTCGCCGC GGTGCTGTCC CGGGGCGGCG GGCTACGGGT GGATCACATT
CTCGGGCTGT TCCGCCTGTG GTGGGTCCCG GACGGCGCCG GCGCCGCCGG CGGCACTTTC
GTCCGCTACG ACGCCGAGGC GCTGCTGGGG CTGCTCGCCC TCGAGGCGCA CCGGGCCGGC
GCCCTGGTCG TCGGTGAGGA TCTCGGCACC GTCGAGCCGT CGGTGGCCGA GGCGCTCGAC
GGCGCCGGGA TCTTCGGCTC CTCGGTGCTG TGGTTCGAGC AGGCGGCGGA CGGCTCCCCG
CTCCCGCCGC GCGAGTACCG GGCCCGGACC ATGGCCAGCG TGACCACGCA CGACCTGCCC
ACCGCCGCCG GCTTCCTCGA GGGCGAGCAC GTGCGCGTGC GCGCGCGGCT CGGCCTGCTC
GCCCGCACCG ACGAGCAGGA ACGCGCCGCC TGGCTCGCCG AACGCGCCGG ACTGCTGCGG
CTGCTCGCCG ACGAGGGCCT GGTGAGCCCG CCGGCGGGGG TCGTGGCGGA GGAGGATCGC
CTCGAACCGG AGCTGCGTGC GGCGGCCGCG CTCGGCCTGC ACGTCCTGCT TGCCCGGTCA
CGCGCGCGGA TCGTGCTGGT CGCTCCCGGT GACGCGTTCG GCGACGTCCG TCAGCCGAAC
CTGCCCGGCA CGGTCGACAG CTATCCGAAC TGGCGGCTAC CGGTCGTCGA CGACGCCGGG
GAGCGCGTCA CCGTCGAACG GCTGATCACC GATCCCCGGT CGCGCCGGAT GGTCGAGGCA
CTCGAGGCAC TCGGGGCGAT CACCGCCGAT CGGGCGGGAG CCACCACCAC CCGGCGCCCC
TGA
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| Protein sequence | MTSAPERPDQ PAAPPAATAP PTTAAPSAAA PSAGGAVGAG GQQGPASVWS GLGDLKALAA
EFGVATSYDG QDGTPVTVQP RAVRAALGLL GVDPSDPAVA LAGAREARRR RPLPPCAVVR
AQAPAPVAVH VPDAAADAVT AEAVLAGGES VPLSVGLRGA VGEVDGHAVR AGTVDLPSGL
PLGDHRLRLS FGGSTTECPL IVVPERVPDF AAAPSPAEAT GRAWGWMIQL YALTSAGSWG
MGDYADLATL AEWSARDGAD VLLVNPLHAV APTFPVEPSP YSPASRRFVS PLYLRPELTP
EYRHASETVR AEVDRLAGVA RREGIRDGLI DRDAVWRAKL AAVELLFTSS GGGTGDGPAG
GQEADGALRD FALWCALAER HGRDWRTWPE DLRDPAGPAV DAARAELAER VAFHVWLQRR
CDDQLGAAQA AARTAGMRVG IVHDLAVGVD PGGADAWAMR GVLATGASVG APPDGFNQQG
QDWGLPPWRP DVLAESGYAP FRAMVAAVLS RGGGLRVDHI LGLFRLWWVP DGAGAAGGTF
VRYDAEALLG LLALEAHRAG ALVVGEDLGT VEPSVAEALD GAGIFGSSVL WFEQAADGSP
LPPREYRART MASVTTHDLP TAAGFLEGEH VRVRARLGLL ARTDEQERAA WLAERAGLLR
LLADEGLVSP PAGVVAEEDR LEPELRAAAA LGLHVLLARS RARIVLVAPG DAFGDVRQPN
LPGTVDSYPN WRLPVVDDAG ERVTVERLIT DPRSRRMVEA LEALGAITAD RAGATTTRRP
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