| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5306 |
|---|
| Symbol | |
|---|
| ID | 5673640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 6387790 |
|---|
| End bp | 6390345 |
|---|
| Gene Length | 2556 bp |
|---|
| Protein Length | 851 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641244163 |
|---|
| Product | aminopeptidase N |
|---|
| Protein accession | YP_001509570 |
|---|
| Protein GI | 158317062 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | [TIGR02412] aminopeptidase N, Streptomyces lividans type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.550867 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.196392 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTCACA ACCTCACCCG CGACGAGGCG CGCGAGCGCG CCCGCCTGCT GGCCGTCTCG
TCCTACGACG TCGAGCTCGA CCTCACGGTC GGCGACGAGA CCTTCCTGTC CAGCACCACC
GCGTCGTTCA CCTGCGCCGA GCCCGGCGCG TCGACCTTCG TCGAGCTGGC CGCCCCGGCG
GTGCGCGAGG TCGTCCTCAA CGGCCGGTCG CTGGACCCGG CGGTGGTCTT CGACGGCGGG
CGGATCGCTC TGCCCGACCT GGCCGCGACG AACGAGCTCC GGGTCGTGGC CGAGTGCGCC
TACTCCCGTA CCGGCGAGGG CCTGCACCGC TTCGTCGACC CCGTCGACAG CGCCGTGTAC
CTCTACACGC AGTTCGAGAC GTACGACGCG CACCGCATGT ACACCTGCTT CGACCAGCCG
GATCTCAAGG CCGCATTCAC CCTCGCGGTG ACGGCGCCCG CCGACTGGCG GATCATCTCC
AACAGCGTGG TCACCGGCAC CACGGCCGCT CCCGACGGCG CGACGCGGAC CGCCTTCGCC
CCGACCCCGG TGATGTCGAC CTACATCACC GCGCTGGTCG CCGGGCCGTA CCACGAGGTG
CGCGACCACC ACGACGGCAT CGACCTCGGG GTGTACTGCC GCCGCTCGCT CGCCGAGTTC
CTCGACCCGG ACGAGATCCT GGAGATCACC AAGCAGGGTT TCGACTTCTA CCACCGGGTC
TTCGACTACC GGTACCCGTT CGGGAAGTAC GACCAGTTGT TCGTGCCGGA GTTCAACGCG
GGCGCGATGG AGAACGCCGG CTGCGTCACC TTCCTCGAGG AGTACGTCTT CCGGGCGAAG
GTCACCGAGG CGCGCCGCGA GCGGCGGGCC GAGACGATCC TGCACGAGAT GGCGCACATG
TGGTTCGGCG ACCTCGTGAC CATGCGTTGG TGGGACGACC TGTGGCTCAA CGAGTCCTTC
GCCACCTACA TGTCCGTGCT GGCGCAGGTG ACGTCCACCC GCTTCACCAA CGGCTGGACC
ACCTTCGCCA ACGCGGAGAA GGGCTGGGCG TACCGCCAGG ACCAGCTCTC CTCGACGCAC
CCGATCGTCG CCGACGCCCC CGACATGGAC GCGGTGCGCA CGAACTTCGA CGGCATCACC
TACGCCAAGG GCGCCTCCGT CCTCAAGCAG CTCGTCGCGT GGGTGGGCCA GGAGGAGTTC
CTCGCCGGGC TGCGCAGCTA CTTCCGCAAG TACGAGTACG GCAACACCTC GCTGAAGGAC
CTGCTCGTCG AGCTGGAGAA GGCCAGCGGG CGGGATCTGA GCCCGTGGTC GGCCGACTGG
CTGGAGACCA CCGGGGCGAA CACGCTGCGG CCGCGGTTCC TCACCGACTC GTCGGGCCTG
TTCACCTCGT TCGACGTCGT CCAGGAGCCG GCGAGCGCCC CCGCGACCGC GTCGCGGACG
CTGCGCCCGC ACCGGGTCGC CATCGGCCTC TACGACCGGG ACACCACGGG CGCCCTCGTC
CGTCGCGAGC GGGTCGAGCT GGACGTCGTC GGGGAGATCA CCGAGGTCTC GAAGATCGTC
GGGGCCCGCC AGCCCGACCT GATCCTGCTC AACGACGACG ACCTCACCTA CGCCAAGGTC
CGGCTGGACG AGCGGTCGCT GCGGACCCTG ATCGACTCGA TCGGGACGAT CTCGTCCTCA
CTGCCGCGCA CGCTGTGCTG GGCGGCGGCC TGGGACATGA CCCGCGACGC CGAGCTGGCC
GCCCGCGACT ACGTCCGGCT CGTGCTGTCC GGCATCGACG CCGAGGACGA CATCGGCGTG
GTGCAGTCGC TGGTCACCAA GGCGGCGCTG ACCGTCGACA GCTACGGCGA CCCGGCGAAC
CGCCCGGCGG CGCTGCGCGA GCTGACCACC CGGGCCGAGG AGCTCATGCG CTCCGCCGAG
CCCGGCAGCG ACCTGCAGCT CGTCTTCGCG ACCGCCTTCG CCCAGACCGA GGAGCCCGAG
CAGATCGCCC GGGTCATGGC GATCTTCGAG GGCTCCGACG TGGTGCAGGG GCTCGCCCTG
GACACCGAGC TGCGCTGGGC CCTGCTCATC CAGCTCGTCG CGCGCGGGGT CTACGGCGAC
GCCGAGATCG GCGCGGAGCT CGCCCGGGAC AACACCGCCA CCGGGGAGAA GCGCGCCGCC
ACCGCGCGCA GCGCCCGCCC GACGGCGCAG GCCAAGGCGG ACGCCTGGTC GGCGGTCATG
GACTCGGACG CCCTGTCGAA CCATCTGGCG GTCGCCACGA TGGGCGGCTT CTGGATCTCC
GACCAGCTCG AGCTGACCCG TCCGTACGTC GACCGGTTCT TCGCCGAGAT CGGCGGCATC
TGGGAGACCC GCTCGTTCGA CACCGCTCAG ACGATCACCC AGATGTTGTT CCCGTCCGGG
GTCATCGAGC AGTCGACGGT GGATCTGACC GACGCCTACC TGGCGGAGCG GGACCCGGTG
CCCGCGCTGC GCCGGGCACT GATGGAGGGC CGGGACGGGC TCGTGCGGGC ACTCGCCGCG
CGGGCAAAGG ACACCGCGGG GCCGGTCGCG GGCTGA
|
|---|
| Protein sequence | MPHNLTRDEA RERARLLAVS SYDVELDLTV GDETFLSSTT ASFTCAEPGA STFVELAAPA
VREVVLNGRS LDPAVVFDGG RIALPDLAAT NELRVVAECA YSRTGEGLHR FVDPVDSAVY
LYTQFETYDA HRMYTCFDQP DLKAAFTLAV TAPADWRIIS NSVVTGTTAA PDGATRTAFA
PTPVMSTYIT ALVAGPYHEV RDHHDGIDLG VYCRRSLAEF LDPDEILEIT KQGFDFYHRV
FDYRYPFGKY DQLFVPEFNA GAMENAGCVT FLEEYVFRAK VTEARRERRA ETILHEMAHM
WFGDLVTMRW WDDLWLNESF ATYMSVLAQV TSTRFTNGWT TFANAEKGWA YRQDQLSSTH
PIVADAPDMD AVRTNFDGIT YAKGASVLKQ LVAWVGQEEF LAGLRSYFRK YEYGNTSLKD
LLVELEKASG RDLSPWSADW LETTGANTLR PRFLTDSSGL FTSFDVVQEP ASAPATASRT
LRPHRVAIGL YDRDTTGALV RRERVELDVV GEITEVSKIV GARQPDLILL NDDDLTYAKV
RLDERSLRTL IDSIGTISSS LPRTLCWAAA WDMTRDAELA ARDYVRLVLS GIDAEDDIGV
VQSLVTKAAL TVDSYGDPAN RPAALRELTT RAEELMRSAE PGSDLQLVFA TAFAQTEEPE
QIARVMAIFE GSDVVQGLAL DTELRWALLI QLVARGVYGD AEIGAELARD NTATGEKRAA
TARSARPTAQ AKADAWSAVM DSDALSNHLA VATMGGFWIS DQLELTRPYV DRFFAEIGGI
WETRSFDTAQ TITQMLFPSG VIEQSTVDLT DAYLAERDPV PALRRALMEG RDGLVRALAA
RAKDTAGPVA G
|
|---|
| |