Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5302 |
Symbol | |
ID | 5673636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6382350 |
End bp | 6383492 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641244159 |
Product | glycosyl transferase family protein |
Protein accession | YP_001509566 |
Protein GI | 158317058 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.157801 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.641383 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTTG TGCCTGTGAG CGTGGTCATT CCCGCTTACA ACGAGGCACT TCGTCTTCCG GCGTCCCTGC CGCGGCTGCT GGCTGTCGTG GGCAAGATCC CCAGGGCTGA GGTGATCGTC GTCGACGACG GCAGCACCGA TGGCACCGCC GGGGTCGCCG AGGACCTGCT CGAGGGCTTT CCGAACCACC GTGTGGTACG CCTGCCGTGG AACTGCGGAA AGGGCACCGC GGTAAGGGCG GGCGTGTCGG CCGCGCATGG CCGGTCGATC GTCTTCATGG ACGCCGACGG GGCCTCCGAC GTGAACGACC TGCCGTTGCT GCTCGCCGCG CTCGAGCACG CCGAGGTGGC GCTGGGCTCG CGGCGAATCG GCGACGGAGC CACCCGGACA AGCGGCCGCA GGGCCGGTAG CTGGGCTTTC AATCAGATTA CGCGTTCACT CGCGGCGCTG GACGTCGCTG ACACGCAGTG TGGCTTCAAG GCGTTTCGGC ACGCGGAAGC CAAGATTCTT TTCAGTCTCG CGCGCTCCAC CGGCTTCGGA TTCGACGTCG AGGTGCTCTC GATCGCGCGC TCGGTTGGCT ATCGCATCGC CGAGGTACCC GTGCGCTGGG AGGAGACGCC CGGCGGCACC TTCCGGATCA CCCGGCACAC CCCCGCGATG CTCGTCGACG TCGTCCGGGC CCGCCGCTAT CTCAGCCGGG TCGGGCTCCC GCCGGTCAGC CGTCGCCAGC GGCTGGGCGA GCTCGGTGTC GTGGACGCGT CCGAGCTGCT CGGCCGGCCG GCCACGCCGC GCGGTGCGGG GGAACCGCAG GGTGCCCCGC CCGGCCAGCT GCCGGTGCCC GCGGCCCCCA CCCGGCCCGG CACACCGGCC CGGCCGACGG CCCGTACCCG GCCCGGCACA CCGGCCCGGC CGGTGCCCGC CGCCCGGCCC ACGACCGCCG CCGCTCCCGC CCGGCCCGCG GCCGTTCCCG CACTGCCCAT GACTCCCGCG CTGCCCGCCG CCCCCGCGCG GCCCCCCGCG GTGCCCCGCC CCACGCCGCG TCCCGCTCCC GCGGTTCCAG CCGTGAGCGT GGCGCACGGG ACCGGGCGGT TCACCCCGTC GCCCTCCCGC GGTGAGATCC CCGGTCCCGC GCCCGCACCG TGA
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Protein sequence | MDLVPVSVVI PAYNEALRLP ASLPRLLAVV GKIPRAEVIV VDDGSTDGTA GVAEDLLEGF PNHRVVRLPW NCGKGTAVRA GVSAAHGRSI VFMDADGASD VNDLPLLLAA LEHAEVALGS RRIGDGATRT SGRRAGSWAF NQITRSLAAL DVADTQCGFK AFRHAEAKIL FSLARSTGFG FDVEVLSIAR SVGYRIAEVP VRWEETPGGT FRITRHTPAM LVDVVRARRY LSRVGLPPVS RRQRLGELGV VDASELLGRP ATPRGAGEPQ GAPPGQLPVP AAPTRPGTPA RPTARTRPGT PARPVPAARP TTAAAPARPA AVPALPMTPA LPAAPARPPA VPRPTPRPAP AVPAVSVAHG TGRFTPSPSR GEIPGPAPAP
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