Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5290 |
Symbol | |
ID | 5673624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6363858 |
End bp | 6364751 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641244147 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_001509554 |
Protein GI | 158317046 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.024265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.868104 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGATCG CGACCTGGAA CATCAACTCG GCCAAGGCCC GGCAGCCCCG GCTGATCGAA TGGCTTGACC GCGCGAGCCC CGACGTGGTC TGCCTGCAGG AGACCAAGCT CTCGGACGAG GCGTTCCTCG AGCTCTTCGA CGAAGATCTC TTCCGCCGCG GCTACCGGGT CGCGCACCAC GGCGACGGCC GCTGGAACGG GGTGGCGATC CTCTCCCGCG CCGGGCTGGA GGATGTGCGG CGCGGGCTGC CCGGCGACCC CGGGTTCCCG GGGCCCGAGC CGCGGGCGAT CTCCGCGAGC TGCGGCGGGA TCCGGATCTG GTCGCTGTAC GTGCCCAACG GGCGCACGGT GGAGGACCCG CACTACGCCT ACAAGCTGGC CTGGCTGGCC GCACTGCGCG ACGTCGTGGC CGAACTCGCC CCGCAGGGGC CGGTGATGAC GCTCGGCGAC TTCAACATCG CGCCGACGGA CGCCGACGTC TGGGACATCG CCGAGTTCGA GGGCGCGACC CACGTGACCG AGGCCGAGCG CGCCGCGCTC GGGCGGCTGC ACGACGCCGG CCTGCTCGAC CTGATGCGCG AGCGCTGGCC GGACGAGACC GTCTACACCT ACTGGGACTA CCGCCAGCTC TGCTTCCCCA AGAACTACGG GATGCGCATC GACCTGACCC TGGCCACGGC CGACGTCGCG GCCCGGGCAC GCGCGGTGTG GGTAGACCGG GCTGCCCGCA AGGGCACCGG GACGAGCGAC CACGCCCCGG TCGTCGTCGA CCTGGACGAG GCGCCGGACG GCGACATCGG CCCGATGGTG CCGCCCCCGT CCTCGCGCGG CTCCTCCGCG CGTGGGTCGT CCTCCCGCGC CGGGGCGGGC ACCCGCCGCC GCGCCTCCAC CTGA
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Protein sequence | MRIATWNINS AKARQPRLIE WLDRASPDVV CLQETKLSDE AFLELFDEDL FRRGYRVAHH GDGRWNGVAI LSRAGLEDVR RGLPGDPGFP GPEPRAISAS CGGIRIWSLY VPNGRTVEDP HYAYKLAWLA ALRDVVAELA PQGPVMTLGD FNIAPTDADV WDIAEFEGAT HVTEAERAAL GRLHDAGLLD LMRERWPDET VYTYWDYRQL CFPKNYGMRI DLTLATADVA ARARAVWVDR AARKGTGTSD HAPVVVDLDE APDGDIGPMV PPPSSRGSSA RGSSSRAGAG TRRRAST
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