| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5288 |
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| Symbol | |
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| ID | 5673622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6362600 |
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| End bp | 6363358 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641244145 |
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| Product | deaminase-reductase domain-containing protein |
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| Protein accession | YP_001509552 |
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| Protein GI | 158317044 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.122038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.871149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCGC GCCCGTACGT GCTTCTGAGC TGCGCGATGT CACTGGACGG GCGGATCGAC
GACTGCTCGC CCCAGCGGCT GGTCCTCTCC AGCCAGGCCG ATCTCGACCG CGTGGACGAG
GTCCGGGCCG GTTGCGACGC GATCCTGGTC GGTGCCCGCA CGCTGCGCCG CGACAATCCC
GGCCTCGCGG TCCGCTCGGA GCGCCGTCGA GCCGAGCGGA CGGCGGCCGG CCGGCCGGCG
ACTCCGCTGC GCGCCGTCCT GACCAGCGGC GGACGGCTCG ACCCGGACGC CCGCTTCTTC
CTGGACGGCG CGGAGAAGGT CGTCTACCGG TTCGCCGGAG CCGCGCCCCG GCCTGCGCCT
GAATCTGGGC CTGGCGCTGG CGCTGGAGCG GGGGCGGGGG CGGGTACCGG GACCGGGTCG
CCGGCGCCGG CCGTCCCCCC GGATCTTTCC GCGGTGGCGA CCGTCGTCGA TCTCGAGGCG
CCGCCGCTGG AGCACCTGCT GGACGACCTG AGCCGGCGCG GCACGCGGCG CCTACTGGTC
GAGGGCGGCA CCACCGTGCA CACCGCGTTC CTCACCGCGG GCCTGGTGGA CGAGCTGCAC
CTGGTCATCG CGCCGTTCTT CGTCGGTGAG GCCGCCGCCC CGACGTTCGT CGGCCCGGGT
TCGTTCCCGT TCGACACCGC GCACCGACTG CGGCTCGTGG ACGTCCGCCA GCTCGACGAC
GTCGTGCTGC TGCGTTACCT GACACCGTCC GTGACCTGA
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| Protein sequence | MTARPYVLLS CAMSLDGRID DCSPQRLVLS SQADLDRVDE VRAGCDAILV GARTLRRDNP
GLAVRSERRR AERTAAGRPA TPLRAVLTSG GRLDPDARFF LDGAEKVVYR FAGAAPRPAP
ESGPGAGAGA GAGAGTGTGS PAPAVPPDLS AVATVVDLEA PPLEHLLDDL SRRGTRRLLV
EGGTTVHTAF LTAGLVDELH LVIAPFFVGE AAAPTFVGPG SFPFDTAHRL RLVDVRQLDD
VVLLRYLTPS VT
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