Gene Franean1_5285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5285 
Symbol 
ID5673619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6357875 
End bp6358309 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content73% 
IMG OID641244142 
Producthypothetical protein 
Protein accessionYP_001509549 
Protein GI158317041 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0193871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.362422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTG CCGACTCACC ACTCGGCGGC AGGCCGGCCG CGCCAGCACC CGGGCCCTCC 
CGGGAACCCC TGGCTTCCCG GGAGCCTGAG CCGCCGCCGG CGTCCGCGCC GTTCGCCGAG
AAGATGGCCT ACTACCGGTC CCAGCACACC ACGCGGGGAA TCCGGGCGAC CCATCTCGTG
GGTATCCCCG GCGTGGCCTT CTCCCTGCCG CTGCTCGTCG GCCGACCCAA GGTGGGCCTG
CCGATGTTCG TGGCGAGCTG GGCACTGCAG GTCGCCGGGC ACTCGGTCTT CGAGCAGAAC
AGCCCCACGC TGGCCAAGGG CTTCGTCACC TACCAGCTGT GCGGGCTGGC GTTCTGGTGC
GAGGAAGTCG CCGATCTGCT CGCCGGGCGC GGCCTGGGCG GTCAGACCCG CCCGCCACGC
CGCTCCCGGA CCTAG
 
Protein sequence
MTTADSPLGG RPAAPAPGPS REPLASREPE PPPASAPFAE KMAYYRSQHT TRGIRATHLV 
GIPGVAFSLP LLVGRPKVGL PMFVASWALQ VAGHSVFEQN SPTLAKGFVT YQLCGLAFWC
EEVADLLAGR GLGGQTRPPR RSRT