| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5272 |
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| Symbol | clpX |
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| ID | 5673606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6341448 |
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| End bp | 6342740 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641244127 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001509536 |
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| Protein GI | 158317028 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.308962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.162196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCACGCA TCGGTGATGG CGGTGACCTG CTCAAGTGCT CCTTCTGCGG TAAGTCTCAG
AAGCAGGTGA AGAAGCTCAT CGCCGGCCCC GGCGTCTACA TCTGCGATGA GTGCATCGAT
CTCTGCAACG AGATCATCGA GGAGGAGCTC TCCGAGTCCT CGGAGCTCAA GTGGGAGGAG
CTCCCGAAGC CCCGGGAGAT CTACGAGTTC CTCGACGGGT ACGTGGTCGG CCAGGAGGCG
GCGAAGAAGA CGCTGTCGGT GGCCGTCTAC AACCATTACA AGCGGGTGCA GGCGGGCGGT
GCCTCCGGCG GTGACGCCGG CAAGGGCGAG GTGGAGCTCG CGAAGAGCAA CATCCTGCTG
CTGGGCCCCA CGGGGTGCGG CAAGACCCTG CTGGCGCAGA CGCTGGCCCG GATGCTGAAC
GTCCCGTTCG CCATCGCCGA CGCGACCGCG CTCACCGAGG CCGGATATGT CGGCGAGGAT
GTCGAGAACA TTCTTCTCAA ACTCATCCAG GCCGCCGACT ACGACGTCAA GAAGGCCGAA
ACCGGCATCA TCTACATCGA TGAGGTCGAC AAGATCGCCC GGAAGTCGGA GAACCCCAGC
ATCACCCGGG ACGTCTCCGG CGAGGGCGTG CAGCAGGCGC TGCTGAAGAT TCTCGAGGGA
ACGACGGCGA GTGTCCCGCC GCAGGGCGGC CGCAAGCACC CGCACCAGGA GTTCATTCAG
ATCGACACGA CGAACGTCCT GTTCATCGTC GGTGGGGCTT TCGCCGGTCT GGACCGCATC
ATCGAGTCGC GCATCGGCAA GAAGTCGCTG GGGTTCCGCG CGGTGCTGCA CGGCAAGGAC
GACCCGGACG CCTCGAACGT CTTCGGTGAC ATCATGCCGG AGGACCTCCT CAAGTACGGA
ATGATCCCGG AGTTCATCGG CCGGCTGCCG ATCATCACCA GCGTCTCCAA CCTCGACCGC
GAGGCGCTAA TCCGGATCCT CACCGAGCCG AAGAACGCGC TCGTCCGCCA GTACAAGCGG
CTGTTCGAGC TGGACGGCGT CGACCTCGAC TTCACCACCG ACGCACTCGA GGCCATCGCG
GACCAGGCCA TCCTGCGCGG GACGGGCGCC CGCGGCCTGC GCGCGATCAT GGAAGAGGTC
CTGCTCTCGG TGATGTACGA CATCCCGAGC CGTAAGGACG TCGCCCGCGC GGTGATCACC
CGGGAGGTCG TGCTCGAGCA CGTCAACCCG ACCCTGGTGC CACGCGACGT CGCCGCGTCG
AAGCGCGGCC CGCGCCAGGA GAAGTCCGCC TGA
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| Protein sequence | MARIGDGGDL LKCSFCGKSQ KQVKKLIAGP GVYICDECID LCNEIIEEEL SESSELKWEE
LPKPREIYEF LDGYVVGQEA AKKTLSVAVY NHYKRVQAGG ASGGDAGKGE VELAKSNILL
LGPTGCGKTL LAQTLARMLN VPFAIADATA LTEAGYVGED VENILLKLIQ AADYDVKKAE
TGIIYIDEVD KIARKSENPS ITRDVSGEGV QQALLKILEG TTASVPPQGG RKHPHQEFIQ
IDTTNVLFIV GGAFAGLDRI IESRIGKKSL GFRAVLHGKD DPDASNVFGD IMPEDLLKYG
MIPEFIGRLP IITSVSNLDR EALIRILTEP KNALVRQYKR LFELDGVDLD FTTDALEAIA
DQAILRGTGA RGLRAIMEEV LLSVMYDIPS RKDVARAVIT REVVLEHVNP TLVPRDVAAS
KRGPRQEKSA
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