| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5262 |
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| Symbol | |
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| ID | 5673596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6325145 |
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| End bp | 6329428 |
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| Gene Length | 4284 bp |
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| Protein Length | 1427 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641244117 |
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| Product | ribonuclease |
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| Protein accession | YP_001509526 |
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| Protein GI | 158317018 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.266118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.176556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGAAG ATCAGATCAT CGAGGACCAG GCCACGCGCT CCGAGGTAAC GCCCTCCGAG
ACCGTGCCCT CCGACAACAC CCTTGCCGAT ACCGCGGCCC CTGCGACGGC GGCTCCCGAG
CCGGTGACTC CCGCGACAGC TGTCGCTGAG TCTGCGGCCC CTGAGAGCGT GACCGCCGAG
ACCGCTCCGC AACGCCCCAC CCGGCGCCGC CGCGCGGCCG GCAGACCGGC CGGGCCGCCA
CCTGAGGAGG CAGGCCCGCC TGCCGCCGCG GCCGATGGCG AGACCGCCGT GGACGCGGCC
GATTCCGCCA CTGGCGCCGG TGCCGGTGCC GTGTCCAGCA CTCTCCCCGT GTCCGACGGT
GCGGCGCCTG ACGCCGCGGT ACCGCTGGTC GAGGCCGGCG CCGAGCCGGC GCCCGAAGCC
GCGCCGGCCA AGCCAGCCCG GCGGGCGAGG ACGACCCGGC CGCGCCGGGC CTCCCGGGAG
GTCAGCGAGG CCGTACCCGA CACCACAGCC ACCCCCGCTC CCTCCGACAC CACGTCGCCC
GCCGCCGGCT CGTCCGACAC GACGTCGCTC GACACCAGGG CACCTGAGAC CACGTCGTCC
GCCACCGCGG CGCCCGAGGC CGGAGCGGAC AACGTCCCCG GCTCGCCCGG GCAGGTCGCG
AAGGGCGACG TCACCGCGTC CGATGCGCTC GCTGACACTA CGGCGTCGGG CGAGGCTGCC
CCCGCCGTGA CCAAGCCGCG TCGCACCCGT GCTCGTCGGG CGGCCACGAA GGTCGAGCCG
GCGGCCGAGA CCGGCACTCC CACGGGTGCG CCGGGCAGCG AATCCGCCGC CTCGGCGTCG
TCCAGCGTGG GCGAGCCGGC GGTCGGGCAG ACTCCCGCCG CCTCCGCTCC GGCCCCCGCC
GCAGCCCCGG ACTCGGTGGC CGACGCGGCC ACCCCGCCGG CTGTCGCGGC CACCTCGCAG
GTGGTAGCGG CCACCTCGCC GGCTCCCGAG CCGGCCATCG ACGAGACCGT CGACCCGCTC
GCGGAGCCGG TCGACGAACT GCCGGCGGAC GCCACCGCCG ACGCGGACGC CGGGACCAGC
GCTGCCGGGA CTGGCGCCGC CGCGACGGAC GCGCCCGGGG CTCAGCCGGC GGTCGCGTCC
TCGCCGGAGC CCGTGATTGC CGCGACGGTG GCGGACACAG CGGCTGTGAC GGGCGCCGGA
ACCACCGGAA CCACCGAAGC CACCCCCGCG GCCGGTCCCG AGGCGGTCGC CGGAACGGAG
ACCGCCCCCG GTCCCGAGGC GGTCGGTGCG CCCGAGCCCC CGCGGGCGGA GCGCACCTCG
CGGCGGCGCA CGCGGGCGGT CGCCCCGACG TGGACCAGCG GCGCCGAGGC CCCCGCCCCC
GCGCCGGTGA CCCGGCAGTC GGCCCGTCGC CCGGTGGCGA TGATCACCTT CCAGCAGCCG
GAGCCGGCGG TCGTGGACCC GTGGCCCCGC CGCCGTCGTG ACGCTGACGA CGCGCCGGCC
GAGCCCGCCG TGACCGGTCG CGGCGGCCTC ACCGGTGCGG GCCTCGACGA CGTGGCCCCG
GCCGACGAGA TCGTCGACGC GGCCGACGAC GCGGTGGCGT ACGACACCGC GGAGTTCGGT
GAGGCACTGG AGACGGAGAG CAGCGAGCAG GCGTTCGACG GCGGCGAGTA CTCGTCCACC
GACGCGGACG GCGACGACGC CGGACCGGGC GGAACCCGCC GCCGCCGCCG CGGCCGCCGT
GGTCGTGGCC GGGCCCGCGG CGAAGACGAG ATCTCCGAGA CCAGTGACCT TGCCGAGGAG
CAGGTCGACG AGGCCGAGGA GCGCGACGAC CGCGAGCTCG AAGCCGAGCC GGTGGAGCGT
GAGCCCAGGT CCTCCCGCCG CCGCTCACGT CGCTCGCCGA CGAGGGAGAC ATTCGACGAG
GCGGAGGAGA TTGACTCCGA AGCCGAGCTG GTGGCCGGAG CCGACTCCGG AGCCGACACC
GACACCGACA CCGAGTCTGA CGCCGACGAC GGCGCGGACC TCGAGGACGG CGCGGACGAC
TCGGCCGAGG ACGGTTCGGA CGATGACCGC GCCGGTGGAT CTCGCCGCCG CCGCCGGCGC
CGCCGCCGTT CCGGGACCGG CGCGGAGACC ACGCCGGTCC CCGACGACCC CCCGAACACC
GTCGTGCACG TGCGCGAGAC GCGCCGGGAC GACGACCTCG TCCGCGGGGT CAGCGGTTCC
ACCCGGCTGG AGGCGAAGCG CCAGCGCCGG CGCGAGGGCC GCGACAGCGG TCGCCGCCGC
GCACCCATCG TCACCGAGGC CGAGTTCCTC GCCCGGCGGG AGTCGGTCGA GCGCCGGATG
ATCGTCCGGC ACAACGGTGA CCGCACCCAG ATCGCCGTGC TTGAGGACGG CGTCCTGGTC
GAGCACTTCG TGACGCGCGC CAGCTCGGCG TCCTACGCGG GCAACGTGTA CCTCGGGCGG
GTGCAGAACG TCCTGGCCAG CATGGAGGCG GCGTTCGTCG ACATCGGCAA GGGCCGCAAC
GCCGTCCTGT ACGCCGGTGA GGTCAACTAC GACGCCTCGG GCCTCGACGG CCGGCCGCGC
AAGATCGAGC AGGTGCTGAA GTCCGGGCAG TCGGTGCTCG TCCAGGTCTC GAAGGACCCG
ATCGGGCACA AGGGCGCGCG GCTGACCAGC CAGGTGAGCC TGCCCGGCCG CTACCTCGTG
TACGTGCCGG ACGGCCAGAA CGCCGGAATC AGCCGCAAGC TGCCGGACAC CGAGCGCGCC
AGGCTGAAGA GCATCCTCAA GAAGATCACT CCGGAGAACG GTGGGGTGAT CGTCCGCACC
GCGGCGGAGG GTGCGAGCGA GGCCGAGCTC GAGCGCGACA TCGAGCGCCT CGTCGCGCAG
TGGGAGGACA TCCAGCGCAA GGCGCAGAAG GCCAGCGCGC CGTCCCTGCT CTACGGCGAG
CCCGACCTGG TGGTGCGGGT CATCCGCGAC ATCTTCAACG AGGACTTCAC CGAGCTGGTC
GTCCAGGGGT CGCACGAGGC CGCGACCGTC GAGGGCTACG TCGACACGGT CGCCCCGGAC
CTGCGCGACC GCGTCCGCCG CTACGTCGGC ACCGGGGACG TCTTCGCCGA GCACCGGGTG
GACGAGCAGC TCGCGAAGGC GCTGGACCGC AAGGTCTGGC TGCCCTCCGG CGGCTCACTG
GTCATCGACC GCACCGAGGC GATGACCGTC ATCGACGTCA ACACCGGCAA GTTCACCGGC
AAGGGCGGCA ACCTCGAGGA GACGGTCACC AAGAACAACC TCGAGGCCGC GGAGGAGATC
GTCCGCCAGC TCCGGCTGCG CGACATCGGT GGCATCATCG TCATCGACTT CATCGACATG
GTGCTGGAGA GCAACCGCGA GCTGGTGCTG CGCCGGCTCA CCGAGTGCCT CGGCCGGGAC
CGGACCCGCC ACCAGGTCGC CGAGGTGACG AGCCTGGGCC TCGTCCAGAT GACCCGCAAG
CGGGTGGGCC AGGGCCTGCT GGAGGCCTAC AGCGAGCCGT GCGCCCACTG CAACGGGCGC
GGTGTGCTCG TCCACCTCGA CTCCGCGCAC TCAAGGGACG CGCAGTCGCG GGACGGGGCA
CAGCCGAGGG AGGCGGCGTC GTCGGCGAGC CAGCCGGCGG CGGAGGCTCC GGCCCAGGCG
GCCGGTACCT CCACGGGCCG CCGCGCACGG CACGCGACAA AGCCCGCTGG TCCAGCCCTC
GTGGCTGCCG CGGTCTCGTC GGCCGTGGAC GGGGCGCATG TCTCCTCGGA CGATGCCAGC
GGGTCCGTGA ACGGCTCCGC ATCGGCTGAA TCGACTGATT CGTCTGGATC AGTTGGATCG
GCTGGGGTGT CGGGGCCGGC GGAGGCGGTG GCTCTTGGTG AACACCCGGC CGCTCAGGCC
GGCGCGTCCT TGCTGGACGC CGTCGCACCG CGGGCCGCCC GGATCGCCGT AACGGTTGGA
GCCGGAAGCG ATCAGGGCAC TGAGAGTAAC GGCGTCGACA GCAACGGCGT CAGTGGCGGG
CCCGGGGCTA ACGGGACCGG GAGTGGCGGG GCCGAGGGCA CCACGGTCGA CGGTGAGTCG
CGGCCGGGTT CCGGCGGAAT CCCGGTGTTC GCGAACACCG ACGATCCGGA CAGCGTTCTG
CATTCCGGTA CGAACGGTGC GGGCACTCCG GCTGGCGCCG AGAAGCCGGC CCGCGCCCGT
CGCCGTCGCG CATCCCGCCC GGTCTCCAAG CCCACGGACA CCGCCCAGCC GATCCCCGTT
CCCTCCGAAG CCACCAGCAC CTGA
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| Protein sequence | MPEDQIIEDQ ATRSEVTPSE TVPSDNTLAD TAAPATAAPE PVTPATAVAE SAAPESVTAE
TAPQRPTRRR RAAGRPAGPP PEEAGPPAAA ADGETAVDAA DSATGAGAGA VSSTLPVSDG
AAPDAAVPLV EAGAEPAPEA APAKPARRAR TTRPRRASRE VSEAVPDTTA TPAPSDTTSP
AAGSSDTTSL DTRAPETTSS ATAAPEAGAD NVPGSPGQVA KGDVTASDAL ADTTASGEAA
PAVTKPRRTR ARRAATKVEP AAETGTPTGA PGSESAASAS SSVGEPAVGQ TPAASAPAPA
AAPDSVADAA TPPAVAATSQ VVAATSPAPE PAIDETVDPL AEPVDELPAD ATADADAGTS
AAGTGAAATD APGAQPAVAS SPEPVIAATV ADTAAVTGAG TTGTTEATPA AGPEAVAGTE
TAPGPEAVGA PEPPRAERTS RRRTRAVAPT WTSGAEAPAP APVTRQSARR PVAMITFQQP
EPAVVDPWPR RRRDADDAPA EPAVTGRGGL TGAGLDDVAP ADEIVDAADD AVAYDTAEFG
EALETESSEQ AFDGGEYSST DADGDDAGPG GTRRRRRGRR GRGRARGEDE ISETSDLAEE
QVDEAEERDD RELEAEPVER EPRSSRRRSR RSPTRETFDE AEEIDSEAEL VAGADSGADT
DTDTESDADD GADLEDGADD SAEDGSDDDR AGGSRRRRRR RRRSGTGAET TPVPDDPPNT
VVHVRETRRD DDLVRGVSGS TRLEAKRQRR REGRDSGRRR APIVTEAEFL ARRESVERRM
IVRHNGDRTQ IAVLEDGVLV EHFVTRASSA SYAGNVYLGR VQNVLASMEA AFVDIGKGRN
AVLYAGEVNY DASGLDGRPR KIEQVLKSGQ SVLVQVSKDP IGHKGARLTS QVSLPGRYLV
YVPDGQNAGI SRKLPDTERA RLKSILKKIT PENGGVIVRT AAEGASEAEL ERDIERLVAQ
WEDIQRKAQK ASAPSLLYGE PDLVVRVIRD IFNEDFTELV VQGSHEAATV EGYVDTVAPD
LRDRVRRYVG TGDVFAEHRV DEQLAKALDR KVWLPSGGSL VIDRTEAMTV IDVNTGKFTG
KGGNLEETVT KNNLEAAEEI VRQLRLRDIG GIIVIDFIDM VLESNRELVL RRLTECLGRD
RTRHQVAEVT SLGLVQMTRK RVGQGLLEAY SEPCAHCNGR GVLVHLDSAH SRDAQSRDGA
QPREAASSAS QPAAEAPAQA AGTSTGRRAR HATKPAGPAL VAAAVSSAVD GAHVSSDDAS
GSVNGSASAE STDSSGSVGS AGVSGPAEAV ALGEHPAAQA GASLLDAVAP RAARIAVTVG
AGSDQGTESN GVDSNGVSGG PGANGTGSGG AEGTTVDGES RPGSGGIPVF ANTDDPDSVL
HSGTNGAGTP AGAEKPARAR RRRASRPVSK PTDTAQPIPV PSEATST
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