| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5259 |
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| Symbol | rpmA |
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| ID | 5673593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6322917 |
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| End bp | 6323204 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641244114 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_001509523 |
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| Protein GI | 158317015 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.137345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.272276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCACA AGAAGGGCGC GAGCTCCTCG CGCAACGGCC GTGACTCGAA CGCCCAGCGG
CTCGGCGTGA AGCGTTTCGG CGGCCAGCTG GTCAAGGCCG GCGAGATCAT CGTCCGGCAG
CGGGGCACCC ACTTCCACCC GGGTGACCTG GTCGGCCGCG GCAAGGACGA CACTCTGTTC
GCGCTGGCTC CGGGCCACGT CGAGTTCGGC CGCAAGCGGG GCCGCCGGGT CGTGAACATC
GTCTCGGCCG ACACCGAGCG TGCCGAGAAG GCCGCCGTAC CGGCCTGA
|
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| Protein sequence | MAHKKGASSS RNGRDSNAQR LGVKRFGGQL VKAGEIIVRQ RGTHFHPGDL VGRGKDDTLF
ALAPGHVEFG RKRGRRVVNI VSADTERAEK AAVPA
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