Gene Franean1_5245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5245 
Symbol 
ID5675756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6307402 
End bp6308151 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content74% 
IMG OID641244100 
Productphosphoglycerate mutase 
Protein accessionYP_001509509 
Protein GI158317001 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.611969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.579785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCTGC TGCTCTGGCG GCACGGGCGG ACGTCCTGGA ACGACGCGGG GCGGTTCCAG 
GGCCACGCCG ATCCTTCCCT GGACTTGACC GGTCAGCGGC AGGCCGAGCT GGTGGGCCCG
TTCATCAGGG CTCTCAACCC TGAGCTCGTG GTCTCCTCGG ACCTGCGCCG CTGCCGGGAG
ACCGCGGCGC GGATCGGCCT GCCCGTCCGC GCCGACGCGC GGCTGCGCGA GATCGACCTG
GGGGCGTGGT CCGGGCTCAC CGGTGCCGAG GCCGCCGCCC GCTTCCCCGC GGAGGACGCC
GCCTGGCGCC GCGGCGAGGA CGTCCGCCGC GGCGGCGGCG AGACGTACGA GGAGGTCGGC
GCACGGGCCG GCGCCGTCTT CGACGACATC GTCGCCGAGG GTCTGCCGGT CACCGCCGGC
GGCCTCGTCG TCTTCGTGTT GCACGGGGGG ACGGCCCGGT CGCTCCTCGG GCGTGTCCTC
GGCGTGCCCG TCCAGAACTG GTGGGTGTTC GGCCCGCTGG GCAACTGCCG CTGGTCGATG
CTGCGGCGCG AGCCGGGCGG GTTTCGGCTG GTGGAGCACA ACACCGGACC CCTCGCCACA
GTCGCCGCGG CGCCTGATAA GGTCGTCAGC GTCGGACCGG GGAGCACAGC TTCCCACCCA
CCAGCCGAGG CGATCCTGCC GACGCAGGAG GCCCCGACGG CAAGCGACAC GGAACCTGTA
CACTCGCAGA CGCAACCGAC AAGCGGTTGA
 
Protein sequence
MRLLLWRHGR TSWNDAGRFQ GHADPSLDLT GQRQAELVGP FIRALNPELV VSSDLRRCRE 
TAARIGLPVR ADARLREIDL GAWSGLTGAE AAARFPAEDA AWRRGEDVRR GGGETYEEVG
ARAGAVFDDI VAEGLPVTAG GLVVFVLHGG TARSLLGRVL GVPVQNWWVF GPLGNCRWSM
LRREPGGFRL VEHNTGPLAT VAAAPDKVVS VGPGSTASHP PAEAILPTQE APTASDTEPV
HSQTQPTSG