Gene Franean1_5232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5232 
Symbol 
ID5673566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6282170 
End bp6283228 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content79% 
IMG OID641244086 
Productmethyltransferase type 11 
Protein accessionYP_001509496 
Protein GI158316988 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGATGC CCGACGACAG TTCCGCGCCA CCGCTGCCGG AGGCGATGAC CGCCGAACAG 
GTCCGCCGCT GGGACGAGGT CCTCGACCGG ATCCGTGTGC TGCTGCCGGC CGGCGCGGCA
CGCGTGCTGG TCGAGGGTGC CGACGGCCGG AGGGCCGCCG CGGTCGCCGA CCGGCTGGCC
GCGGCGGTGC GCGGGGCCGG CCGGCCGTGC GTCCGGCCGG CGGCCCTCAA GACGGCAGCC
CCCGAGACGA CGACGGCCGC GCGGCCCGGC GAGACGGTGC TGCTCGCGCA CAGCTCCGAC
CGGCCCGCCG ACCGCACGTC GACAGCCTGG GACCTGGTCG TCGAGCTGCG CACCCGCGCT
GACCGCGACG ACGATCCCGA TCGGCCCGCG GACGTCGTCG TCGACCTGCA CGATCCGGCG
TGGCCGGTGA TCCGCCGGGT CGCGGAGCGG CTCGCGGCCG ACGACGGCTG GCACGTCACC
GAGAGCCGGG CGTTCTTCGC CGTACGCGCC GCCACCTGGG ACACCCGCTT CGGCGACGAC
ACTCCCGCCT ACACCGCGGC GGTGGCCGAG CTGGGCCTGC CGACGGGGGC GACCGTCCTC
GACGTCGGCT GCGGCACCGG CCGGGCGCTG CCCGTGCTGC GCGCGGCCGT CGGCCCGGCC
GGCACGGTGC TCGGGCTGGA TGTCACCCCC GAGATGCTCG CCGTGGCCCG GGAACACGGC
CGGGCGGGGC ATGCCGATCT CCTCCTCGGC GACGCCCGCC GCCTGCCCGT GCGGACCGGC
GCGGTTGACG CGGTGTTCGC CGCCGGGCTG GTCACCCACC TCCCCGACCT GCCGGCCGGG
CTTGCCGAGC TGGCCCGGGT CAGCCGCCCC GGCGGCCGGC TGGCGATCTT CCATCCGTCT
GGCCGGGCGG CGCTCGCCGC CCGGCACGGG CGCGTGCTGC GCCCCGACGA GCCGCTGGCG
GCGGACCGGC TCGGCCCCCT GCTCGCCGGC TCCGGCTGGC GGCTCGACGG CTACGACGAC
CCGCCGCACC GCTTCCTCGC ACTGGCCTCC CGCCGCTGA
 
Protein sequence
MWMPDDSSAP PLPEAMTAEQ VRRWDEVLDR IRVLLPAGAA RVLVEGADGR RAAAVADRLA 
AAVRGAGRPC VRPAALKTAA PETTTAARPG ETVLLAHSSD RPADRTSTAW DLVVELRTRA
DRDDDPDRPA DVVVDLHDPA WPVIRRVAER LAADDGWHVT ESRAFFAVRA ATWDTRFGDD
TPAYTAAVAE LGLPTGATVL DVGCGTGRAL PVLRAAVGPA GTVLGLDVTP EMLAVAREHG
RAGHADLLLG DARRLPVRTG AVDAVFAAGL VTHLPDLPAG LAELARVSRP GGRLAIFHPS
GRAALAARHG RVLRPDEPLA ADRLGPLLAG SGWRLDGYDD PPHRFLALAS RR