| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5230 |
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| Symbol | |
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| ID | 5673564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6280636 |
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| End bp | 6281322 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641244084 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001509494 |
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| Protein GI | 158316986 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCTGGG CTGAGCGTGC CGCCGACCGG TCGCCGTCCG TGCAGCGGTC GAGATCGCGC
AGCATGCGCC AGATGAAGGT CATCGTCGCC GCGGCCAAGC GGCTGATCGC ACAGAAGGGC
ACATCCTTCA CGACGCAGGA GCTCGTGAAG GAGGCCGGTG TCGCGATGCA GACCTTCTAC
CGCCACTTCG AGGGCAAGGA CCAGCTCCTC ATGGCGGTCA TCGAGGAGAT GGTCACCGAT
CAGGCCGTGC GCTACGAGCA GGACGCCCGC GACCTGCCGG ACCCGGTCGC CCGCCTGCGC
CGCCACATAA TGGCCGTGCT CGGCTCGCTC GACGCCAGCG GGGACGAGAG CACCGGGCCC
CGGTTCATCA CCGCGGAGCA CTGGCGCCTG CACCAGCTGT ACCCGGAGGA GATGGCGCAG
GCCACGCAGC CCTTCGCCGA CCTCGTGGCA CGCGAGATCC GTGCGGCGCG CGACGCCGGC
CTGCTGGCCC CGCAGGACGT CGAGCGCGAC GCGGCACTGG TCGCCCGGCT CGTCATGTCC
GTCTACCATC ACTACGCCTT CGCGGCTGCT CCCGAGCCCG CAGAGGTGAT CGCTGATCAT
CTCTGGGCGT TCTGCCTGGC GGGGCTCGGC GGCGACCTGG GCGGCGGGCG CCCGGCACGG
CCGGTCAGAC GTCCGCCTTC TTCGTGA
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| Protein sequence | MSWAERAADR SPSVQRSRSR SMRQMKVIVA AAKRLIAQKG TSFTTQELVK EAGVAMQTFY
RHFEGKDQLL MAVIEEMVTD QAVRYEQDAR DLPDPVARLR RHIMAVLGSL DASGDESTGP
RFITAEHWRL HQLYPEEMAQ ATQPFADLVA REIRAARDAG LLAPQDVERD AALVARLVMS
VYHHYAFAAA PEPAEVIADH LWAFCLAGLG GDLGGGRPAR PVRRPPSS
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