| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5228 |
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| Symbol | |
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| ID | 5673562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6278551 |
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| End bp | 6279423 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641244082 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001509492 |
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| Protein GI | 158316984 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACT TATTGGAGGA CCGCGTCGTC GTGGTCACCG GCGGCGCCAG CGGGATCGGC
CGCGCGAGCG TCCTGCGCTT CCTCGCCGCC GGCGCGCGTG TGGTCTTCGG CGATGTGAAC
GGCGCGACCG CCCAGCGGCT GCTCGACGAG GTCGCCGACC CCGCCCGGCT CCATTTCGAG
CGGGCGGACG TGGCCGACGA GGCGGAGGTC GCCGCGCTCG TCGCCGCGGC CGTCGAGCGG
TTCGGGCGCC TTGACGTCAT GTTCAACAAC GCCGGGGTCG GCGGGGCGTT CGGCCCGCTC
ACCGACATCG ACGTCGCCGA CTGGGACCGC ACCTTCGGCG TGATCAGCCG TGGGATGTTC
CTCGGGACGA AGCACGCCGC CCGGGCGATG ATCGCCCAGG GCGGCGGCGG GTCGATCATC
AACAACTCCT CGGTCGCCGG AGTCGGCGGC GGTGGCGGCC CGACCGCGTA CTCCGCGGCG
AAGGCCGCGG TCATCAACTT CACCTGCAAC GCGGCCGTGG AACTGGCGGC CCACCGCATC
CGGGTCAACG CGATCTGCCC CGGTCTCGTC GACACGCCGC TGGTGATGGG GCGCGACGAG
GCGGCCATCC GGGCCCGGAT GGCGACCTTC CAGCCCTGGC CCGACCTGGG CCGGCCCGAG
GACATCGCCG GCATCGTGCT CTTCCTCGCC GGTCCGGACA GCGCCTTCCT GACCGGGGAG
GCGATCCGGG TCGACGGCGG GATGGTCGCC TGGGGCCCGC GGATGACCGA CACCTCCGAC
CCCCGGGGCG TGACCCGCCG GTTCACGGGC TTCACCGAGG GCTCGACCGG CCGTCCACTG
ACCAAGCGCC CCCTGGACGG CGCCGGTACC TGA
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| Protein sequence | MPDLLEDRVV VVTGGASGIG RASVLRFLAA GARVVFGDVN GATAQRLLDE VADPARLHFE
RADVADEAEV AALVAAAVER FGRLDVMFNN AGVGGAFGPL TDIDVADWDR TFGVISRGMF
LGTKHAARAM IAQGGGGSII NNSSVAGVGG GGGPTAYSAA KAAVINFTCN AAVELAAHRI
RVNAICPGLV DTPLVMGRDE AAIRARMATF QPWPDLGRPE DIAGIVLFLA GPDSAFLTGE
AIRVDGGMVA WGPRMTDTSD PRGVTRRFTG FTEGSTGRPL TKRPLDGAGT
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