Gene Franean1_5227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5227 
Symbol 
ID5673561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6277820 
End bp6278476 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content76% 
IMG OID641244081 
Productcadmium resistance transporter 
Protein accessionYP_001509491 
Protein GI158316983 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4300] Predicted permease, cadmium resistance protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.580258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCCGG GCGCCGTCGG GCAGGCGATC GGCCTGTTCG CCGTCACCAA CATCGACGAC 
ATCCTGGTGC TGGCGCTGTT CTTCGCCCGC GGCGCCGGTG ACCGGCGCGC CGTGCCGCGG
ATCGTCGCCG GCCAGTACGT CGGGTTCGTC GGAATCGTCG CCGTCGCCGC CGCCGCCGCG
TCCGGAGCGG CGCTCCTGCC CGAGTCCGCG ATCGCCTACC TCGGCCTGCT CCCGCTCGCC
CTGGGCCTAC GCGCGGCCCG GCGGTCCCTG GCGGAACGCG GCGACCACGC GGCCGCGACG
ACCGGAGATC CCGCCGGCCC CGACCCCGAT GACGAGGCCG GGGGTGAGGA GCAGGACAGG
GACGCTTCGC GCAGGGGGCC GGCCGCGCTC GAGGTCGCCG CGGTCACCTT CGCGAACGGC
GGCGACAACC TCGGCGTGTA CGTCCCGGTC TTCACCGCGG TCGGCGCGGG CGGGACGGCC
GTCCACGCGG TGGTCTTCCT CGTGCTGGTG GGCGTCTGGT GCGCGGCCGG CTGGTTCCTT
GCCACGAGGC CGCCGGTCGC CCGCGCGCTG AGCCGCTGGG GGCACCTGCT GCTGCCGCTG
GCCCTGGTTG CCATCGGCCT GACGATCCTC GTCGAGGGCG GGGCCTTCGG TCTCTGA
 
Protein sequence
MNPGAVGQAI GLFAVTNIDD ILVLALFFAR GAGDRRAVPR IVAGQYVGFV GIVAVAAAAA 
SGAALLPESA IAYLGLLPLA LGLRAARRSL AERGDHAAAT TGDPAGPDPD DEAGGEEQDR
DASRRGPAAL EVAAVTFANG GDNLGVYVPV FTAVGAGGTA VHAVVFLVLV GVWCAAGWFL
ATRPPVARAL SRWGHLLLPL ALVAIGLTIL VEGGAFGL