Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5227 |
Symbol | |
ID | 5673561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6277820 |
End bp | 6278476 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641244081 |
Product | cadmium resistance transporter |
Protein accession | YP_001509491 |
Protein GI | 158316983 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4300] Predicted permease, cadmium resistance protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.580258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCCGG GCGCCGTCGG GCAGGCGATC GGCCTGTTCG CCGTCACCAA CATCGACGAC ATCCTGGTGC TGGCGCTGTT CTTCGCCCGC GGCGCCGGTG ACCGGCGCGC CGTGCCGCGG ATCGTCGCCG GCCAGTACGT CGGGTTCGTC GGAATCGTCG CCGTCGCCGC CGCCGCCGCG TCCGGAGCGG CGCTCCTGCC CGAGTCCGCG ATCGCCTACC TCGGCCTGCT CCCGCTCGCC CTGGGCCTAC GCGCGGCCCG GCGGTCCCTG GCGGAACGCG GCGACCACGC GGCCGCGACG ACCGGAGATC CCGCCGGCCC CGACCCCGAT GACGAGGCCG GGGGTGAGGA GCAGGACAGG GACGCTTCGC GCAGGGGGCC GGCCGCGCTC GAGGTCGCCG CGGTCACCTT CGCGAACGGC GGCGACAACC TCGGCGTGTA CGTCCCGGTC TTCACCGCGG TCGGCGCGGG CGGGACGGCC GTCCACGCGG TGGTCTTCCT CGTGCTGGTG GGCGTCTGGT GCGCGGCCGG CTGGTTCCTT GCCACGAGGC CGCCGGTCGC CCGCGCGCTG AGCCGCTGGG GGCACCTGCT GCTGCCGCTG GCCCTGGTTG CCATCGGCCT GACGATCCTC GTCGAGGGCG GGGCCTTCGG TCTCTGA
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Protein sequence | MNPGAVGQAI GLFAVTNIDD ILVLALFFAR GAGDRRAVPR IVAGQYVGFV GIVAVAAAAA SGAALLPESA IAYLGLLPLA LGLRAARRSL AERGDHAAAT TGDPAGPDPD DEAGGEEQDR DASRRGPAAL EVAAVTFANG GDNLGVYVPV FTAVGAGGTA VHAVVFLVLV GVWCAAGWFL ATRPPVARAL SRWGHLLLPL ALVAIGLTIL VEGGAFGL
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