| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5212 |
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| Symbol | |
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| ID | 5673546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6255472 |
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| End bp | 6257043 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641244066 |
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| Product | putative monovalent cation/H+ antiporter subunit D |
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| Protein accession | YP_001509476 |
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| Protein GI | 158316968 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000590255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGTCC TGGCGGTTCT CCCGGTCGTG GTGCCCCTGC TCGCCGCCGG CGCCGTGCTC
GTCCTGCGCG GCCGGGTGCG GGCGCAGCGG ATCCTCGCGC TCCTGGTGGT CGCGGGTGTC
GTCGCCGACG CGGTGGCGAT CGTCGTGATC GCCGACACCG ACGGTCCGCT GGTCGCGAAC
CTGGGCGGAT GGCCGGCGCC GATCGGCATC ACGCTGGTCG CGGACCGGCT CTCCGGCCTG
CTGCTGCTCA CCTCGGCCGT CGTCACCTTC GCGGTGCTCG CCTACGCGAT CGGCCAGGGC
GTCACGGAGG ACACTCGCCG CGGCAACAGC TCGATCTTCC AGTCGGTGTA CCTGGTCCTG
GTCGCCGGTG TGGCGCTCGC GTATCTCACC GGCGACCTGT TCAACCTGTT CGTCGCGTTC
GAGGTCATGC TGGTCTCGTC CTACGTGCTG ATCACGCTCG ACACCACCGC GGGGCGCATC
CGCGCCGGCA TGACCTACGT GATCGTCAGC ATGACGTCGT CCCTGCTGTT CCTCACGATG
CTGGCGCTGG TCTACGCGGC GACCGGGACG ATGAACCTCG CCGACCTGTC GGGGCGGGTC
GGCGAGCTGC CGGAGGGCCT GGCCGGGGCG CTCGGCCTGC TGGCCCTGGT CGTCTTCGGT
ATCAAGGCGG CGGCCGTCCC GCTGCACTTC TGGCTGCCGG ACAGCTACCC GACGGCACCG
GCACCGGTCA CGGCCGTCCT CGCCGCCCTG CTGACCAAGG TCGGCGTGTA CGCGCTGCTG
CGGACGCACA CCCTGGTGTT CGCGCATGAC GGGGTGTGGG TGCTGCTGCT GGTCGCCGCG
GTGGTCACGC TGCTCGTCGG CGCCCTCGGC GCGCTCGCCC AGGACAACCT GAACCGGATG
CTGTCGTACC TGCTGGTGAG CCACATCGGC TACATGCTGT TCGGCCTGTC GCTGTTCACC
GTGATCGGCC TCACCGGCGT GATCATCTAT ATGGTGCACC ACATCGTGGC GCAGGCCGCG
CTGTTCCTGG CCAGCGGACT GATCACCCGG TACGCCGGGA CGTCGGTGCC GCGGCGCATG
GGCGGGCTGG CGGCCGCCGT GCCGGCGACG GCGGTGCTCT TCGCGCTGCC GGCGCTCAGC
CTCGCGGGCA TCCCCCCGTT CTCCGGCTTC GTCGCGAAGC TGACCCTGCT CGAGGCCGGG
TCCGGGGTCG GCACCTGGCC GGTTTACGCC GCGGTCGCCG CCGGCCTGGC CACCAGCCTG
CTGACGCTCT ACGCGATGGC CCGGGTATGG ACGCTGGCCT TCTGGGGATC GCGCCGGGCG
AGCGTGCCCG ATCCGGAGCC CGCGGACGAC CTGGTGGTCG GGACGGAGCG GGTGAACCGC
CCGATGATCC TGGCGACCGG TGGGATCGTC GCCGTCGGGC TGGCCGCCGC GGTGTTCGCC
GGCCCGCTGG CCGCGCTGAG CCAGCGGGCC GCGGACGACC TGCTCGAGCC GTCGGGCTAC
GTGGAGTCCG TGCTTCCGGG CGCCGTCCCG GTGGGGCTCC CGCGGGCCGT TCCGGCAGGG
GCTGGCCGAT GA
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| Protein sequence | MSVLAVLPVV VPLLAAGAVL VLRGRVRAQR ILALLVVAGV VADAVAIVVI ADTDGPLVAN
LGGWPAPIGI TLVADRLSGL LLLTSAVVTF AVLAYAIGQG VTEDTRRGNS SIFQSVYLVL
VAGVALAYLT GDLFNLFVAF EVMLVSSYVL ITLDTTAGRI RAGMTYVIVS MTSSLLFLTM
LALVYAATGT MNLADLSGRV GELPEGLAGA LGLLALVVFG IKAAAVPLHF WLPDSYPTAP
APVTAVLAAL LTKVGVYALL RTHTLVFAHD GVWVLLLVAA VVTLLVGALG ALAQDNLNRM
LSYLLVSHIG YMLFGLSLFT VIGLTGVIIY MVHHIVAQAA LFLASGLITR YAGTSVPRRM
GGLAAAVPAT AVLFALPALS LAGIPPFSGF VAKLTLLEAG SGVGTWPVYA AVAAGLATSL
LTLYAMARVW TLAFWGSRRA SVPDPEPADD LVVGTERVNR PMILATGGIV AVGLAAAVFA
GPLAALSQRA ADDLLEPSGY VESVLPGAVP VGLPRAVPAG AGR
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