Gene Franean1_5209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5209 
Symbol 
ID5673543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6254236 
End bp6254598 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content77% 
IMG OID641244063 
Productmonovalent cation/proton antiporter, MnhG/PhaG subunit 
Protein accessionYP_001509473 
Protein GI158316965 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1320] Multisubunit Na+/H+ antiporter, MnhG subunit 
TIGRFAM ID[TIGR01300] monovalent cation/proton antiporter, MnhG/PhaG subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000878225 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCC AGGTGATCTC CGCGGTGCTG CTGCTGACCG GCGCGCTGTT CTGCCTGCTC 
GGCGCCTGGG GCCTGCTGCG GTTCCCGGAC GTCCCCTCCC GGCTGCAGGC GGCCACCAAG
CCCCAGACGG TCGGCCTGGT GTCGATCCTG CTCGGCAGCG CCGTCCAGCT CGCGCCCCGC
CACGCCGCCG GGCTGCTGCT CGTCGCGCTG CTGCAGCTCG TCACGGCGCC CGTGATCGCC
CAGCGGGTCG GCCGGGCGGC CTACCGCACC GGCCGGTTCC GCCACGACCT GCTGGTCGTG
GACGAGCTGG CCCGGCGCCG GGGCGGAGTC GCCAGCCCAG GCCAGGCCGC CGAACACCGG
TGA
 
Protein sequence
MARQVISAVL LLTGALFCLL GAWGLLRFPD VPSRLQAATK PQTVGLVSIL LGSAVQLAPR 
HAAGLLLVAL LQLVTAPVIA QRVGRAAYRT GRFRHDLLVV DELARRRGGV ASPGQAAEHR