Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5200 |
Symbol | valS |
ID | 5673534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6240968 |
End bp | 6243598 |
Gene Length | 2631 bp |
Protein Length | 876 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641244054 |
Product | valyl-tRNA synthetase |
Protein accession | YP_001509464 |
Protein GI | 158316956 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.725067 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGGCAA CGGACAGTAC GGAACGGCCG ACCCGCGCGG TGCCCGCCAA GCCGAGCTTG GACGGGATCG AGACCCGCTG GTCCGAGCAG TGGCACGAGC GCGGGACCTA TGAGTTCGAC CGGTCGGCGC CGCGGGAGCG GGTCTACTCG GTCGACACCC CGCCACCGAC CGTCAGTGGC TCGCTGCACG TAGGCCACGT GTTCTCGTAC ACCCACACAG ACCTGATCGC CCGCTTCCAG CGGATGCGCG GGCGCGAGGT CTTCTACCCC ATGGGGTTCG ACGACAACGG GCTGCCGACC GAGCGCCGGG TGCAGAACTA CTACGGCGTG CGGTGCGACC CGTCGCTGCC CTACGACCCG GATTTCACCC CGCCGGAGAA GCCGGGCAAG GACCAGCTCC CGATCTCCCG GCGCAACTTC GTCGAGCTCT GCGAGACGCT GACGATCGAG GACGAGAAGG GCTTCGAGGA GCTCTGGCGC CGTCTCGGGC TCTCCGTCGA CTGGTCGCAC ACCTACGCGA CCATCGACAC CCGGTCCCGC GCGGTGGCGC AGCGGGCCTT CCTGCGTAAC CTCGCCCGCG GCCAGGCCTA CCTGGCCGAG GCCCCGACGC TGTGGGACGT CACGTTCCGC ACCGCGGTCG CCCAGGCCGA GCTGGAGGAC AGGGAGCGCC CCGGCGCGTA CCACACGCTC GCGTTCGGGC GGCCCGGCGG CGACCCGGTG GTGATCGAGA CGACCCGCCC GGAGCTGCTG CCGGCCTGCG TGGCACTCGT GGCGCATCCC GACGACGCGC GCTACCAGCC GCTGTTCGGG CAGACGGTGC GCACGCCGCT GTTCGACGTC GAGGTGCCGG TGGTGGCGCA CCGGCTGGCT GATCCGGAGA AGGGCTCCGG CATCGCCATG ATCTGCACCT TCGGTGACCT CACCGACGTC ATCTGGTGGC GTGAGCTGCG GCTGCCCGCC CGCGCGGTGA TCGGCCGGGA CGGCCGCCTG ATCGCCGAGG CCCCCGAGGC GATCTCGTCG CCGGCCGGCC GGGAGCACTA CGCCCAGCTC GGCGGGAAGA CGATCGCCGC CGCGCGGACG GCGATCGTGG CGGCCCTGCA GGAGTCCGGC GCGCTGCTCG GTGAGCCGCG GGCGATCAAT CACCCGGTCA AGTTCTACGA GAAGGGCGAC CGGCCGCTCG AGATCGTCAC CACCCGCCAG TGGTACATCC GCAACGGCGG CCGGGACGAG CAGTTGCGTG AGCAGCTGCG CCAGCGTGGC AGCGAGCTGC GCTGGCACCC CGAGTACATG CGGGTGCGCT ACGAGAACTG GGTGGACGGC CTCAACGGCG ACTGGCTGAT CAGCCGGCAG CGTTTCTTCG GTGTGCCCTT CCCGGTCTGG TATCCGCTCG ACGCGGACGG CCAGCCCCGC CACGGCGCCC CGATCGTCGC GGCCGAGGCC ACCCTGCCCG TGGACCCGTC CAGTGACGTC CCCCCGGGCT ACACGGCCGA GCAGCGGGGC GTGCCCGGCG GCTTCATGGC CGACCCCGAC GTCATGGACA CCTGGGCCAC CTCCTCGCTG ACGCCGCTGA TCGCCAGTGG CTGGGAGAGC GACCCGGCGC TGTTCGCGCA GGTGTTCCCG ATGAACCTGC GCCCCCAGGC GCACGAGATC ATCCGGACCT GGTTGTTCTC GACCGTGCTG CGCAGCCACG ACGAGTTCGG CACGCTGCCC TGGACGGACG CGGCGATCTC GGGTTGGATC CTCGACCCGG ACCGCAAGAA GATGTCGAAG TCCAAGGGCA ACGTGGTCAC GCCCATGGGC CTGCTCGAGC AGCACGGCTC GGACGCCGTC CGCTACTGGG CGGCCTCGGG CCGTCCGGGC ACCGACACGG CCTTCGACGT CGGCCAGATG AAGACCGGCC GCCGGCTCGC GATCAAGATT CTCAACGCGA GCCGGTTCGT GCTGGGCCTC GCCGAGGCGG GCGAGGGCGA GGCCTTCGAG GGCGACGCGG CCCTCGCGGC CGACGCCGCA CCCGGCCCGG CGGCGATCAC CGAACCGCTG GACAGAGCGC TGCTCGCCGA GCTCGCCCGG GTCGTCGACA CGGCCACCGG CGCGTTCGAG GGCTACGACT ACACCCGGGC GCTCGAGGTC ACCGAGACCT TCTTCTGGCG GTTCTGCGAC GACTACGTCG AGCTGGTCAA GGGCCGGGCG TACGGCGGGC ACGGGGAGGC CGGCGCCGCC TCCGCCCGGG CGACGCTGTC GATCGCGCTG TCGACGCTGC TCACCCTGTT CGCGCCGTTC CTGCCGTTCG TCACCGAGGA GGTCTGGTCC TGGTGGCGGG CGGGCTCGGT GCACCGAGCC CGCTGGCCGG AGGCCGCCGA GGTCCGCGAG GCCGCCGGGG ACGGCCGTCC CGAGCTGCTG GACGCGGTCG GCGCCGCGCT CTCCGCGGTG CGCCGGGCCA AGTCCGAGGC GAAGGTGTCG ATGAAGGCCG AGGTCGCCAC CGCCCGGGTC AGCGGTGACG CCGACGTCGT CGCGCTGGTC GGGCAGGCTG CCGTGGACCT GCGCAGCGCC GGCGGGATCT GGGAGCTGAG CCTGGTCGGC ACCGGCGGCG AGCTGGCCGT CGACGTGGTG CTCGTCCCGC CGGCCGGCTG A
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Protein sequence | MVATDSTERP TRAVPAKPSL DGIETRWSEQ WHERGTYEFD RSAPRERVYS VDTPPPTVSG SLHVGHVFSY THTDLIARFQ RMRGREVFYP MGFDDNGLPT ERRVQNYYGV RCDPSLPYDP DFTPPEKPGK DQLPISRRNF VELCETLTIE DEKGFEELWR RLGLSVDWSH TYATIDTRSR AVAQRAFLRN LARGQAYLAE APTLWDVTFR TAVAQAELED RERPGAYHTL AFGRPGGDPV VIETTRPELL PACVALVAHP DDARYQPLFG QTVRTPLFDV EVPVVAHRLA DPEKGSGIAM ICTFGDLTDV IWWRELRLPA RAVIGRDGRL IAEAPEAISS PAGREHYAQL GGKTIAAART AIVAALQESG ALLGEPRAIN HPVKFYEKGD RPLEIVTTRQ WYIRNGGRDE QLREQLRQRG SELRWHPEYM RVRYENWVDG LNGDWLISRQ RFFGVPFPVW YPLDADGQPR HGAPIVAAEA TLPVDPSSDV PPGYTAEQRG VPGGFMADPD VMDTWATSSL TPLIASGWES DPALFAQVFP MNLRPQAHEI IRTWLFSTVL RSHDEFGTLP WTDAAISGWI LDPDRKKMSK SKGNVVTPMG LLEQHGSDAV RYWAASGRPG TDTAFDVGQM KTGRRLAIKI LNASRFVLGL AEAGEGEAFE GDAALAADAA PGPAAITEPL DRALLAELAR VVDTATGAFE GYDYTRALEV TETFFWRFCD DYVELVKGRA YGGHGEAGAA SARATLSIAL STLLTLFAPF LPFVTEEVWS WWRAGSVHRA RWPEAAEVRE AAGDGRPELL DAVGAALSAV RRAKSEAKVS MKAEVATARV SGDADVVALV GQAAVDLRSA GGIWELSLVG TGGELAVDVV LVPPAG
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