| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5199 |
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| Symbol | |
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| ID | 5673533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6239938 |
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| End bp | 6240939 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641244053 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001509463 |
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| Protein GI | 158316955 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACA GGCCCGACGC GGGCGGCCCC GGTGCGCTGG CCGAGGCGTT CGAGGCGGAG
CGCGGGTACC TGCGCGCCGT GGCCTACCGC ATCCTCGGCT CGGTCACCGA CGCCGAGGAC
ATCGTCCAGG ACGCCTGGCT GCGCCTCGCC CGGACCGACC CGGCCGCCAT CGAGGACCTG
CGCGGATGGC TGACCGTGGT CGTCGGCCGG CTCTGCCTCG ACCATCTCCG CTCGGCTCGG
GTCCGGCGGG AGACCTACGT CGGGCCGTGG CTGCCCGAGC CGCTGGTCGA CCCGTCCGGT
CTGGGCGGGT CGGGTGGGTC GGCCGGCGGG GGCGGCGCGA CCGGCCCGGT CGGCGAGGTC
ACGGCCGTGG CCGCCGAGCG GGCCGACCCG GCGGACCGGG TCACCCTCGC CGAGTCGGTC
AGCATGGCCA TGCTGGTCGT CCTGGAGTCA CTGAGCCCGG CCGAGCGGAC CGCGCTGATC
CTGCACGACG TCTTCGGCTA CGGCTTCGAG GAGGTCGCCG AGGTGACCGG CCGCAGCCCG
GCCGCCAGCC GGCAGCTCGC CAGCCGCGCC CGGCGGCACG TGCGGGAGCG GGCCGTCCGC
TTCGATCCCG ACCCGGCCCA GCGGCGCGGT GTCGCCGATG CGTTCCTGGC GGCCGCCGCC
GGCGGTGACC TGGCCGCGCT GCTGCGCGTC CTCGACCCGG ACGTCGTGCT GCGCTCGGAC
GGCGGCGGTG TGGTGCGCGC CGCGCTGCGC CCGATCGACG GGGCGGACAA GGTGGCGCGG
TTCCTACACG GCCTGATCGA GAAGGGCCGC CGGCAGTACG GGGCCGCGGT GCGCTTCGTC
CCGGTCGAGG TCAACGGGGG AGCGGGTATC GCCACGTACA CCGGTCCGCG GCTGGTGAAC
GTCGTCGCGC TCACGGTGTG GCGCGGGCTG GTCACGGAGA TCGACGTCGT GGTCAACCCG
GCGAAGCTGC GCCATCTCAC GCAACCGCCA CACGGCGGCT GA
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| Protein sequence | MTDRPDAGGP GALAEAFEAE RGYLRAVAYR ILGSVTDAED IVQDAWLRLA RTDPAAIEDL
RGWLTVVVGR LCLDHLRSAR VRRETYVGPW LPEPLVDPSG LGGSGGSAGG GGATGPVGEV
TAVAAERADP ADRVTLAESV SMAMLVVLES LSPAERTALI LHDVFGYGFE EVAEVTGRSP
AASRQLASRA RRHVRERAVR FDPDPAQRRG VADAFLAAAA GGDLAALLRV LDPDVVLRSD
GGGVVRAALR PIDGADKVAR FLHGLIEKGR RQYGAAVRFV PVEVNGGAGI ATYTGPRLVN
VVALTVWRGL VTEIDVVVNP AKLRHLTQPP HGG
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