| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5196 |
|---|
| Symbol | |
|---|
| ID | 5673530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 6237998 |
|---|
| End bp | 6238693 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641244050 |
|---|
| Product | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut |
|---|
| Protein accession | YP_001509460 |
|---|
| Protein GI | 158316952 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0756] dUTPase |
|---|
| TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA CCACCCCCAC GCCACCCGGC GCCCCGCTTC CTGTCGGCGC CCTGCGCGCC
TACGTTCCAC CAGCCGACGC CGTGCCCGGT GATGGCGTGG CCGGCGACAT CGTCCTCGGC
GCGCAGCGCC CCGAGCCGCC GACCCGCCAG CCGACCGGTG ATTCGGTGCC GCCGACCGGC
CAGCAGGCCG CCGGCGCGGG CACGCTGGAG GTGCTGGTCC GCCGTCTGGA CCCGGATCTC
CCGCTGCCCG CCTACGCCCA GCCCTCGGAC GCCGGCGCCG ACCTGGTGAC CGCGCAGGAC
GTCACGCTGG CGCCCGGTGA ACGGGCCATC GTCGGAACCG GCCTCTCCGT CGCGCTGCCC
GAGGGTTATG CGGCTTTCGT GCATCCCCGC AGCGGACTGG CCGCGCGACA CGGTCTGTCC
GTGGTCAACG CCCCCGGAAC CGTCGATGCC GGTTACCGTG GAGAAGTCAA GGTGATACTT
ATAAACACCG ATCGAAGTGA AGTCATCGCT CTCCGTCGTG GGGATCGGGT GGCTCAGCTC
GTGGTCCAGC GGGTGGAGCA CGCGGTCTTC CGCGAGGTCG ACCTGCTCCC GGATTCCGTC
CGGGGTGCGG GCGGCTTCGG GTCGACGGGC GGTTTCGGGC GGTCCTCCGA CGGTGGACCG
CGAAGGGAGG GCCACGGTGT TCGGTCGGGG TCGTAG
|
|---|
| Protein sequence | MTATTPTPPG APLPVGALRA YVPPADAVPG DGVAGDIVLG AQRPEPPTRQ PTGDSVPPTG
QQAAGAGTLE VLVRRLDPDL PLPAYAQPSD AGADLVTAQD VTLAPGERAI VGTGLSVALP
EGYAAFVHPR SGLAARHGLS VVNAPGTVDA GYRGEVKVIL INTDRSEVIA LRRGDRVAQL
VVQRVEHAVF REVDLLPDSV RGAGGFGSTG GFGRSSDGGP RREGHGVRSG S
|
|---|
| |