Gene Franean1_5195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5195 
Symbol 
ID5673529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6237328 
End bp6237984 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content75% 
IMG OID641244049 
Producthypothetical protein 
Protein accessionYP_001509459 
Protein GI158316951 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCG ACCCGAGGGC GGAGGAGCCG GACGACGTCG ATCTGGTCGG CCCCTTCGAC 
CTCGAGGAGG CGCCCGACGA CGACGTGCAC AGGCTCGACC TCGGGGCGCT GCGGGTGCCG
GCGCTGCGCG GCGTCCAGGT GCAGTTCCAG GTGGAGGAGT CGACCGGCAA GCCGCTCACC
GTCGTCGTGA CGGACGGGCG CAGCGCCATG GAGCTCGCGG TGTTCGCCGC GCCGAAGACC
AGCCCGCTGT GGGACGACGT CCGCACGGAG ATCCTGGAGA CCGTGCGGGA CACCGGCGGC
AGCGAGGTCG AGGGCCCGTA CGGGCTGGAG CTGCGGCTGC GGCTGCCCAC GAGCCAGCCG
GGGGAGACCG TGCCCGGGCG GATGATCGGC GTCGACGGGC CCCGCTGGTT CCTGCGGGCC
GTCGTGACCG GCGCGGCGGG GCAGGACCCG TCGGCCGGGC CGCTGCTCGA CGAGACGCTC
GGTGGGATCA TTGTGGTCCG CGGCGACTCG GCGATGCCCG TGCGGGATCC GCTGCCGCTG
CGGCTGCCGA AGGAGATCTC CGAGCATCCG GACGGCCCCG GCGCGGAAGC CGAGCAGCGC
TCGGATTCCA GGCCCGCGAT CCCGGTTCCC GGCGTTCGGG TCAGCGAGAC CCGCTGA
 
Protein sequence
MAADPRAEEP DDVDLVGPFD LEEAPDDDVH RLDLGALRVP ALRGVQVQFQ VEESTGKPLT 
VVVTDGRSAM ELAVFAAPKT SPLWDDVRTE ILETVRDTGG SEVEGPYGLE LRLRLPTSQP
GETVPGRMIG VDGPRWFLRA VVTGAAGQDP SAGPLLDETL GGIIVVRGDS AMPVRDPLPL
RLPKEISEHP DGPGAEAEQR SDSRPAIPVP GVRVSETR