Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5191 |
Symbol | |
ID | 5673525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6234166 |
End bp | 6234897 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641244045 |
Product | TrkA domain-containing protein |
Protein accession | YP_001509455 |
Protein GI | 158316947 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0357985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTGCC AGGACAGGTG GCCGACAGAC ATCGACCGGG CAACCCCGAT CGGACTACGC TCACCTCCCG TGCACGTCGT GATCCTCGGC TGCGGCCGGG TCGGCTCATC CCTGGCTGGT GCCGTCGAGC GGCTCGGCCA CTCGGTGGCC GTCATCGACC AGAACCCGGC CGCGTTCAAT CGCCTGTCGG CCGGCTTCGG CGGACGGGCG GTGACCGGCA TGGGCTTCGA CCGGGACACC CTCGTCGAGG CCGGCATCGC CGGGGCGGCC GCGTTTGCCG CGGTCTCCAG CGGGGACAAC TCGAACATCA TCTCCGCCCG GGTAGCCCGG GAGATGTTCG GCGTGGAGCG GGTGGTGGCC CGCATCTACG ATCCCCGGCG GGCCGAGGTC TACGAACGCC TCGGCATCCC CACCGTCGCC ACGGTGCGCT GGACGCGCGA CCAGATCCTC GGTCGTCTCG TCCCGGACGC CGTCACCCCC GAGTGGACGG ACACGTCCGG CTCGGTTCTG CTCACGGCGG TCACGCCGGC GCGTGGCTGG GTGGGACGGC GGCTCGCCGA GCTGGAGTCC CGGGCCGAGG TCAGGGTGGC GTGCGTGACC CGGTTCGGTG ACGGCCTGCT CCCCGACGGG CGGACCATGG TGCAGGACGG CGACGTCCTG CACGTCGCGG TCGCCAAGGC GCGGGCCACC GAGGCGGACG CGATCATCCG CACCGGCCCC GACCACGACT GA
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Protein sequence | MSCQDRWPTD IDRATPIGLR SPPVHVVILG CGRVGSSLAG AVERLGHSVA VIDQNPAAFN RLSAGFGGRA VTGMGFDRDT LVEAGIAGAA AFAAVSSGDN SNIISARVAR EMFGVERVVA RIYDPRRAEV YERLGIPTVA TVRWTRDQIL GRLVPDAVTP EWTDTSGSVL LTAVTPARGW VGRRLAELES RAEVRVACVT RFGDGLLPDG RTMVQDGDVL HVAVAKARAT EADAIIRTGP DHD
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