Gene Franean1_5183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5183 
Symbol 
ID5673517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6221605 
End bp6222687 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content76% 
IMG OID641244037 
Producthypothetical protein 
Protein accessionYP_001509447 
Protein GI158316939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGGGC CCGCCGCCGC ACCGGCAGCG GGCCCCGACG AGGCCCGCCC GGCGGAGGAA 
CCGGCTGCCC TCGCCGCCCG TCGGGGCGTG CGGTGGTGGG TGGTCCGCGC AGCCCTGGTG
CTCGCCGCCG CGCTTCTGGT CGTGGCGCTG GTCGGCCAGT GGAACGACGT CCGGGACTCG
CTGGGCGACC TGACCGTTCT CGGTGTCGTC GGCTCCGGCG TGGCGACGAC GCTCGCGGTC
GGCGCCACCG TCCTGTCCTG GCGTGCCGTG CTCGCCGGGC TCGGTGCGCT GCTGCCGCTG
CGCGCCGCCG TCCGGATCTT CTGCGTCGGC CAGATCGGTA AGTACATTCC GGGCAGTGTG
TGGCCCGTCC TCGCCCAGAT GGAGCTCTCC CGCGACTACG GGGTCTCCCG GCCGAAGTCG
GCCCTGGCGA GTCTTGTGGT GCTCGCGCTG GCGGTGCCCT GCGGCGGTCT GGCCGCGGCC
GTCACCCTGC CCTTCTCCTC CCGCGACGCG CTCGCCGACT ACTGGTGGGC GCTGGCGGTG
GTGCCCGTCT TCGCGGTGGT GCTCTACCCT CCGGTGCTCT CCAGGCTGCT GGCGGTCGCG
TTCCGGCTGC TGCGCCGCCC GCCGCTGACC GAGCCGCTGA CCGCCCGCCC CATCGCCGTC
GGCGCCGGCT GGCTGCTGGG CAGCTTCGCC TGCTACGGCG TGGGGACCTG GCTGCTGGTC
CGTGACCTGC AGCCGGAGGT CGGCGGCGCC CGGCTGGTGG CGCTGTGCGT CGGCGCCTAC
GCCCTGGCCT GGACCGCGGG CTTCCTGGTG CTCGTCCTGC CCGCGGGCGC GGGCGTGCGT
GAGGCCGTAC TGGTGCTTGC CCTGGCCCCG GCGCTGCCGA GTGGCCCGTC GACGCTGATC
GCTCTTGTCG CGCGCCTGCT CGCCACGGTC GCCGACATCG TCTGGGCGCT GGTCGGGGTG
GCGCTGCGCC CGCGTGGCGA GGCGGTCGCC AGTAGGCCGG AGGACCTCGC CGGGTCGGGC
CAGACCGGCC CACGGGCCGG GGGCGCCGCG GCCGTCGCCC AGCCGGCGCC GAGTAACCGC
TGA
 
Protein sequence
MRGPAAAPAA GPDEARPAEE PAALAARRGV RWWVVRAALV LAAALLVVAL VGQWNDVRDS 
LGDLTVLGVV GSGVATTLAV GATVLSWRAV LAGLGALLPL RAAVRIFCVG QIGKYIPGSV
WPVLAQMELS RDYGVSRPKS ALASLVVLAL AVPCGGLAAA VTLPFSSRDA LADYWWALAV
VPVFAVVLYP PVLSRLLAVA FRLLRRPPLT EPLTARPIAV GAGWLLGSFA CYGVGTWLLV
RDLQPEVGGA RLVALCVGAY ALAWTAGFLV LVLPAGAGVR EAVLVLALAP ALPSGPSTLI
ALVARLLATV ADIVWALVGV ALRPRGEAVA SRPEDLAGSG QTGPRAGGAA AVAQPAPSNR