| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5182 |
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| Symbol | |
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| ID | 5673516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6219749 |
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| End bp | 6221215 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641244036 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001509446 |
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| Protein GI | 158316938 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACA AGCGATCCGC CACTGTCTGG ACGTTCGTCG TGACGTCCAT AACGGCGTTC
ATGGTGGCCC TGGACAACCT GGTGGTCACC ACCGCACTCC CCCAGATCCG CGGCGACCTC
GGGGCGGGCC TGGAGGGCCT CGAATGGGTG GTGAACGCCT ACACGCTGCC GTTCGCGGTG
TTGCTGCTGA CCGGCGCCGC GCTCGGCGAC CGGCTCGGGC GGCGGGCCGT GTTCGCCACC
GGGCTCGGGG TGTTCACCCT GGGCAGCCTC GGCGCGGCGC TCGCGCCGTC CATCGAGGCG
CTCATCGCCG CCCGGGCCAT GCAGGGCGTC GGCGCGGCGC TGGTCCTGCC ACTGAGCCTG
ACGCTGCTGT CGGCGGCGGT CCCACCCGAG CGCCGGGGCG CCGCGCTCGG CGTGTGGGGG
GCGATGTCCG GGCTTGCCGT GGCCGTCGGG CCCCTGGTCG GTGGCGCGAT CACCGACGGG
GCGAGCTGGC AGTGGATCTT CTGGCTGAAC GTGCCGATCG GCCTGGTGAC GGTCCCGCTC
GCGCTGCGCA GGCTCACGGA GTCCCGCGGG CCGGCCGGAC GGCTGGACCT GCCGGGTGTC
GCGATCATCT CCGCCGGGCT GCTCGGCGTC ACACTCGGGC TGGTCCGCGG TGAGAGCCAC
GGGTGGACGA GCCCGGCCGT CCTGACGTCA CTGCTGGCCG GCGTGGCCGG GGTCGGCGCC
TTCATCGCCT GGGAGCGGCG CGTGGCCCGG CGCGGCGGGA GCCCCATGCT GCCGATGGCC
CTGTTCCGCC GCCGCGGGTT CGCAGCGGTG AACGCCGTGT CGCTGCTGTT CTCGGTCGGC
ATGTTCGGGT CGATCTTCCT GTTGGCGCAG GCCCTGCAGA ACGTCTTCGA CTACTCGCCC
CTCGAGGCCG GCATCCGCAC GCTGCCCTGG ACGGCGATGC CCCTGCTGAT CGCCCCGATC
GCCGGACCGC TCTCGGATCG GATCGGTGGG CGCCCGCTGA TCGTGGCCGG TATGGCGATC
GAGGCCGTGA GCCTGGCCTG GCTCGCGACG ATCCTGGACA CCGGGGCCGA CTACGCCGGG
CTCGTCCCAC CCTTCGTCCT GGCCGGGGTG GGCATGGCGC TGTTCTTCGT TCCGGTCGCG
TCGGTGGCCC TCGGTTCGGT CCCGGCGGAG CAGGAGGGTC TCGCCTCCGG CACGAACAAC
GCGATGCGCG AGCTCGGCGG CGTCCTGGGC GTCGCGGTGC TGGCCTCGGT CTTCGCCGCG
AACGGCGGCT ACGCGAGCCC GGGGGCGTTC GTGGACGGCA CCCGGCCCGC GCTGTGGGTG
GGGGCGGCCG TCCTGCTCAC CGCCGCGGCA GTGGCCACGC TGCTGCCGTC GCCCGCGAGG
ACGGCAGCGC CCGCGACGCC CCCGGCACCC GCCGCGCCTG CGGCCTCCCA GGCCCTGCCC
GTGGTCGGCA GGCCGTCGTC CGCCTGA
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| Protein sequence | MTDKRSATVW TFVVTSITAF MVALDNLVVT TALPQIRGDL GAGLEGLEWV VNAYTLPFAV
LLLTGAALGD RLGRRAVFAT GLGVFTLGSL GAALAPSIEA LIAARAMQGV GAALVLPLSL
TLLSAAVPPE RRGAALGVWG AMSGLAVAVG PLVGGAITDG ASWQWIFWLN VPIGLVTVPL
ALRRLTESRG PAGRLDLPGV AIISAGLLGV TLGLVRGESH GWTSPAVLTS LLAGVAGVGA
FIAWERRVAR RGGSPMLPMA LFRRRGFAAV NAVSLLFSVG MFGSIFLLAQ ALQNVFDYSP
LEAGIRTLPW TAMPLLIAPI AGPLSDRIGG RPLIVAGMAI EAVSLAWLAT ILDTGADYAG
LVPPFVLAGV GMALFFVPVA SVALGSVPAE QEGLASGTNN AMRELGGVLG VAVLASVFAA
NGGYASPGAF VDGTRPALWV GAAVLLTAAA VATLLPSPAR TAAPATPPAP AAPAASQALP
VVGRPSSA
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