| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5178 |
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| Symbol | |
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| ID | 5673512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6213861 |
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| End bp | 6215360 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641244032 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_001509442 |
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| Protein GI | 158316934 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.504791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGATTGC TCGGCCGACT GGGCTGCCAG GCCGGTCATT CACACGTACC ATCGCCGATC
GTGACGTCGA CGGTTCCTGA CTCAACGCAC CAGGTCAGTG AGGGTGCGGC GATCGATGCT
GCCGCCGCTG TCGAAGAGTC GGCAACTGTA CCCATCCCGC TGCTGGAGCC GGCCGGTGGC
GTCCCGCCCG TCCTCGACGA CCCGCAGGAC CTCACCCGCG CCACCGAGCG GCTGGCCGCC
GGCACCGGCC CGGTCGCCTT CGACGCCGAG CGCGCCTCCG GTTACCGGTA CAGCCAGCGT
GCCTACCTCG TCCAGATCAG GCGGGCCGGC GCGGGCACCC TGCTCATCGA CCCGATCGCC
CTGCCCGACC TGAGCGGCGT GCAGGACGCC GTCGGCGACA CGGAATGGGT GCTGCACGCC
GCCAGCCAGG ACCTGCCCTG CCTGGCCGAG CTGGGCCTGC GCCCGAAGAC GCTGTTCGAC
ACCGAGCTCG CCGGCCGTCT GCTGGGCTAC GAACGGGTGG GGCTGGGCGC CATGGTCGAG
CGGGTGCTCG GCTTCGGGTT GGAGAAGGGG CACTCCGCCG CCGACTGGTC GAACCGCCCG
CTGCCCGAAC CGTGGCTGCG CTACGCCGCT CTCGACGTGG AGCTGCTGGT GGAGCTGCGC
GACCAGCTCG AGAGCGAGCT GGTCGCGCAG AACAAGATGG CGTTCGCCCG GCAGGAGTTC
GACGCGATCG CCGCCGCTCC GCCGCGGGAG CCGCGGGCCG AGCCGTGGCG GCGCACGAGC
GGGATCCACC GCGCGCGCAG CCGCCGCCAG CTCGCCGCCG TCCGGTCGAT GTGGCAGGCC
CGAGACCGGG TCGCCCGCAC CCGCGACATC GCGCCGGGCC GGGTGCTGCC CGACATCGCG
ATCATGGACG CGGTACTGAA GGCCCCCGAG GACGCCGCCG CGCTGACCCG GCTGCCGATC
TTCTCCGGGC CGCGGCTGCG GCGCTCGGCG ACCACCTGGA TGGATGCCCT GCGCGCCGCC
GCCGAGATGC CCGAGAACCA GCTGCCGAGC ACCGCGGGCC CGGGCGGCGA CGGCCTCCCC
CCGCAGAACC GCTGGGCGGA ACGTGACCCC GTGGCGGCGG CGCGGCTGGC CCGCGTGCGC
GCGGCGCTGA ACGCGATCGC CGAGGATCAG GGCATGCCGG TGGAGAACCT GCTGGAGCCG
GCACTCGCCC GCCGGGTCAC CTGGACTCCC CCGGCCACAC GGGACACCGA GACGGTGACC
GCCGCGCTGA CCACGGGCGG CGCCCGCCCC TGGCAGGTCG AGCTGACGGC GGCCGCGGTG
GCCGCGGCCC TGGTGGACCC GCCCGCGGGC ACCGCCGCCG CGCCCGGAGC CACCGGCGGC
GAGACCGCCG GCGGCGGAGC GGGCGGCACC GGTTCCGCGG CGGGCGGCGG GTCCGCGCGG
GCGAGAACGC GGCGGACCGG CGGCCGTCCG CTGTCCGGTG GGGAACCCGC CGCGTCCTGA
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| Protein sequence | MRLLGRLGCQ AGHSHVPSPI VTSTVPDSTH QVSEGAAIDA AAAVEESATV PIPLLEPAGG
VPPVLDDPQD LTRATERLAA GTGPVAFDAE RASGYRYSQR AYLVQIRRAG AGTLLIDPIA
LPDLSGVQDA VGDTEWVLHA ASQDLPCLAE LGLRPKTLFD TELAGRLLGY ERVGLGAMVE
RVLGFGLEKG HSAADWSNRP LPEPWLRYAA LDVELLVELR DQLESELVAQ NKMAFARQEF
DAIAAAPPRE PRAEPWRRTS GIHRARSRRQ LAAVRSMWQA RDRVARTRDI APGRVLPDIA
IMDAVLKAPE DAAALTRLPI FSGPRLRRSA TTWMDALRAA AEMPENQLPS TAGPGGDGLP
PQNRWAERDP VAAARLARVR AALNAIAEDQ GMPVENLLEP ALARRVTWTP PATRDTETVT
AALTTGGARP WQVELTAAAV AAALVDPPAG TAAAPGATGG ETAGGGAGGT GSAAGGGSAR
ARTRRTGGRP LSGGEPAAS
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