| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5175 |
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| Symbol | hemE |
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| ID | 5673509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6210539 |
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| End bp | 6211621 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641244029 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001509439 |
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| Protein GI | 158316931 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0841992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTCG GAAGTACCGC CGTTGCGCCG CCTCGCCCCG GGGTCTCGCC CCGACGTCCA
GGTCTCGCCG CGACTTCGCC GTTCCTGCGC GCCGCCGCCG GGGACCGCCC CGACAGCGTG
CCCGTGTGGT TCATGCGGCA GGCCGGCCGG GTGCTTCCCG AGTACCGCGC CCTGCGCGCC
ACCACCGCCA TGCTCGATTC CTGCCGCAAC GCCGACATGG TCACCGAGAT CACCCTGCAG
CCGGTGCGCC GTTTCCGGCC CGACGCCGCG ATCTTCTTCT CGGACATCGT CCTGCCGCTC
GCGGCCGTCG GGGTGGACGT CGACATCGTC GCCGGGGTCG GGCCCGTGGT GGCCCATCCC
GTCCGGGCGC CGTCCGACCT GGACGTGCTG CGCCCGCTGG AGCCCGGTGA CGTGCCCTAC
GTGAGCGAGG CGGTGGCCTC CCTGGTCCGC GAGCTCGGGC AGACGCCGCT GATCGGTTTC
GCCGGCGCGC CGTTCACCCT GGCCAGCTAT CTGATCGAAG GCGGGCCGAG CCGCAACCAC
ACCCGCACGA AGGCGCTCAT GTACGCCGAG CCGGCGCTGT GGCACGACCT GCTCGGCCGG
CTCGCCGACA TCACGGCCGC CTTCCTGCGG GTGCAGGTCG ACGCCGGCGC CGACGCCATC
CAGCTGTTCG ACTCGTGGGC GGGCGCGCTC AGCGAGGACG ACTACCTGCG CTACGTGGCT
CCGCACAGCA CCCGGGTTCT CGCGGCGTTC GCCGACGACG GCATCCCGCG CATCCACTTC
GGGGTGAACA CCGGGGAGCT GCTCGGCGCG ATGGGCGCGG CCGGCGCGGA CGTCGTCGGG
GTCGACTGGC GCGTCCCGCT GGACGAGGCC GCCCGCCGGG TCGGCCCCGG TCGTGCCGTG
CAGGGCAACC TCGACCCGGC CGCGGTCTTC GCCCCGTCCG ACGTGCTCGC GGCGAAGGTC
CGCGACGTCT GCCGCCGGGG TGCGGCCGCT CCCGGGCACA TCTTCAACTT CGGGCACGGC
GTGCTTCCGG AGAGTGATCC GGGCGTGCTG GCGCACATCG TGGACCTCGT CCACCAGTTC
TGA
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| Protein sequence | MSLGSTAVAP PRPGVSPRRP GLAATSPFLR AAAGDRPDSV PVWFMRQAGR VLPEYRALRA
TTAMLDSCRN ADMVTEITLQ PVRRFRPDAA IFFSDIVLPL AAVGVDVDIV AGVGPVVAHP
VRAPSDLDVL RPLEPGDVPY VSEAVASLVR ELGQTPLIGF AGAPFTLASY LIEGGPSRNH
TRTKALMYAE PALWHDLLGR LADITAAFLR VQVDAGADAI QLFDSWAGAL SEDDYLRYVA
PHSTRVLAAF ADDGIPRIHF GVNTGELLGA MGAAGADVVG VDWRVPLDEA ARRVGPGRAV
QGNLDPAAVF APSDVLAAKV RDVCRRGAAA PGHIFNFGHG VLPESDPGVL AHIVDLVHQF
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