| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5174 |
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| Symbol | |
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| ID | 5673508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6208899 |
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| End bp | 6210311 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641244028 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_001509438 |
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| Protein GI | 158316930 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1232] Protoporphyrinogen oxidase |
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| TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00221395 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGGTTG TGATCATTGG AGCGGGTATC GCAGGGCTGT CCGCCGCGAG CGCGCTGACG
GGCAGGGCCG AGGTCACCGT GGTCGAGGCC GGTGACCGCA TCGGCGGCAA GCTGCGCACC
ACCCCGATCG AGGGGCTGGC GGTGGAGGAG GGCGCGGAGG CCTTCCTCGT CCGCGTGCCG
GAGGCGCTCC GGCTGGCCCG GCACGTCGGG CTCGGGCACG ACATCGTGCA TCCGACGACG
ACCAAGGCCT CGCTGTGGGT GGGCGGGCGG CGCCGTCCCA TCCCGCCCAA CACGATGCTG
GGGGTCCCGA CCGACGTGCT CGGCCTGGTG CGCTCCCGGG TGCTCTCGCC CTTCGGGCTG
CTGCGCGCCG CGGCCGACCT GGTGCTCCCG CGCACGACCC TGCCGACGGA CCCGACGGTC
GGCGGGTACG TCGGCGCCCG CGTCGGGCGG GAGATCGTGG ACCGGCTGGT GGACCCGCTG
CTCGGCGGCG TCTACGCCGG GCGGGCCGAC GCGCTCTCGC TGCAGGCGAC CGTCCCCCAG
CTCACCCCGA TCGCGACCGA GGACCGCTCG CTGCTGCTCG GCGCGCACCG CGTCCGGGCC
CGGACCGGAC CGGCCCCGGC GCAGACGCCC GTGTTCGCCT CGCTGCGCGG CGGCCTGGGC
TCGTTCGCGG AGAAGGTGGC CAGCACCAGC GGTGCCACGG TGCGGACCGG GCTGATGGCC
CGGGAGCTGC GCCGGGTCGA GGGCGGCTGG CAGGTGCGCT GCGACCCGGT GGGCGGCGGT
GAGGTGCCCC CGCCCCTGGT CGCCGACGCG GTGATCCTCG CGGTTCCCGC CGGCGCCGCG
CGTGATCTCC TCTCCCCGAT CGCCCCGCAC GCGGCCGCGC CCCTCGCGGG GGTGCCATAC
GCGTCGGTGG GCCTGGTCAC ACTGCTCTAC CGGGGAGCTG TGCCGCCGCC CGGCAGCGGC
CTGCTCGTCC CCGCGCGGGC CGGCCTGTCG ATCAAGGCGG TGACCTACCT GTCGGTGAAA
TGGCCGCACA TCGCCCGCGG TGGCGACCTG ACGGTCGTGC GGGCCAGCGT GGGCCGTGCC
GGCGCCGACG ACGACCTGCG GCGCGGCGAT GTCGAGCTCG CCGGCGTCGC CGCCGCCGAG
GTCGCCCAGG TCACCGGGAT CAGCGCCCGT CCGATCGCCA ACCGGGTCAG CCGCTGGGGC
GGGGCGCTCC CGCAGTACCT GCCGGGGCAC CTAGGTCGGA TCGCGGCCGT CCGGCGCGCG
CTGCCGGCGG GCATCGCGCT CGCCGGCGCC GGCTACGACG GTGTGGGCAT CCCGGCGTGC
ATCCGTTCCG GCGAGGCGGC CGCGGCGTCG GTGGTGGGCC AGCTGCGGCC GGACGGGACG
CAGGCGGCGG AGTCCGAGCC GGCGGGGGCC TGA
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| Protein sequence | MRVVIIGAGI AGLSAASALT GRAEVTVVEA GDRIGGKLRT TPIEGLAVEE GAEAFLVRVP
EALRLARHVG LGHDIVHPTT TKASLWVGGR RRPIPPNTML GVPTDVLGLV RSRVLSPFGL
LRAAADLVLP RTTLPTDPTV GGYVGARVGR EIVDRLVDPL LGGVYAGRAD ALSLQATVPQ
LTPIATEDRS LLLGAHRVRA RTGPAPAQTP VFASLRGGLG SFAEKVASTS GATVRTGLMA
RELRRVEGGW QVRCDPVGGG EVPPPLVADA VILAVPAGAA RDLLSPIAPH AAAPLAGVPY
ASVGLVTLLY RGAVPPPGSG LLVPARAGLS IKAVTYLSVK WPHIARGGDL TVVRASVGRA
GADDDLRRGD VELAGVAAAE VAQVTGISAR PIANRVSRWG GALPQYLPGH LGRIAAVRRA
LPAGIALAGA GYDGVGIPAC IRSGEAAAAS VVGQLRPDGT QAAESEPAGA
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