| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5172 |
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| Symbol | |
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| ID | 5673506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6205118 |
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| End bp | 6206626 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641244026 |
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| Product | undecaprenyl-phosphate galactose phosphotransferase |
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| Protein accession | YP_001509436 |
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| Protein GI | 158316928 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00967107 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGCTG GCACGCAGTT CGACTTCGCC CACGTCGAGA CCTCGCCCGA CGCGACCAGC
TACCGGGCCC AGGTCGGCTG GGAGCGGCGC TACGTCCGGC TGCTGGTGCT CTTCGACGCG
ATCGCCTGTG TGATCTCCGC GGGCCTGGCC TACTTCGTCC GCTTCGGGGA CGTCGTCGAC
TTCGACACCG AGCCGCCCTC CTCGAAGCCG TACATCATCA TGACGGTCCT GCTGCCGCTG
GCCTGGGTGC TGGCGATGTC GCTCAACCGC GCCTACGAGA GCCGCTTCCT CGGCGGCGGG
TCGGAGGAGT TCCGGCGGGT CGTCAACGCC GCCGCCCGGC TCACCGCGCT GGTCGCCGTC
GCCTCCTACG CGACGAAGGC CGAGATCGCC CGTAGCTACG TGCTCATCGC CTTCCCGGCC
GCCACGCTGC TGTCGGTGGC CGGCCGCTCC GCCGGGCGCG GCATCCTGCA CCGCATGCGG
CGGCAGGGGC GTTGCCTGCA CCGTGTCCTC GTCGTGGGGG CCGGCGAGTC CGCGGCCACC
CTCGTCCGGC TCGCCCAGCG CGACCCGACC ACCGGCTGGT CCGTCGTCGG TGTCTGCCTG
GACCGCCTGC CCGGCCGGCA CAGCCACGAC CGCCCCGAGC GCAGCGGGTT CGACCTGCTC
GGCGTGCCGA TCGTCGGCAC CTCGGAGAAC CTGCACACCG CCATCCAGGC GACCCACGCG
ACCACCGTCG CGATCGGCCC GCAGATGGAC GGCGAGACAC TGCGCCGGGT CCTGTGGGCC
CTCGAGGGCA GCGACGTGGA CGTCCTGGTC AGCTCGGCGC TGACGGACGT GACCGGGCCG
CGGATCTCGA TCCGGCCGGT GGCCGGCCTG CCGCTGCTCC ACATCGAGGA GCCCGAGCTC
AGCGGCACGC GCCGGCTGAT GAAGATGGCC TTCGACCGGA TCGTCGCCGG CACCGCGATC
CTGCTGTTCG CTCCGCTGCT GATCGGGCTC GGCCTGGCGG TGCGGTTCAC CAGCCGCGGT
CCGGCGATCT TCAAACAGAT CCGGGTCGGG CGCGGCGGCA GCGAGTTCCG GATGTACAAG
TTCCGTTCGA TGTATGTAGA CGCCGAGCAG CGCAAGGCCG AGCTCGAGTC GAGCAACGAG
CGCGCCGAGG GCCTGCTGTT CAAGATGCGG GACGACCCTC GGATCACCAA GGTGGGCAAG
TTCCTCCGGA AGTGGTCGCT CGACGAGCTG CCCCAGCTGT TCAACGTGGT CAACGGCAGC
ATGTCGCTGG TCGGCCCGCG CCCGCCGCTG CCCTCGGAGG TCGCGCGCTA CGAGGACGAC
GTCTACCGCA GGCTGATGGT CAAGCCCGGC CTCACCGGGC TGTGGCAGAT CAGCGGGCGC
AGCGACCTGG AGTGGAACGA GTCCGTCCGG CTCGACCTGC GCTATGTCGA GAACTGGTCG
CTGGCCATGG ACTTCGTCAT CCTGTGGCGC ACGCTGTTCG CCGTGCTGCG CCGCGAGGGC
GCCTACTGA
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| Protein sequence | MPAGTQFDFA HVETSPDATS YRAQVGWERR YVRLLVLFDA IACVISAGLA YFVRFGDVVD
FDTEPPSSKP YIIMTVLLPL AWVLAMSLNR AYESRFLGGG SEEFRRVVNA AARLTALVAV
ASYATKAEIA RSYVLIAFPA ATLLSVAGRS AGRGILHRMR RQGRCLHRVL VVGAGESAAT
LVRLAQRDPT TGWSVVGVCL DRLPGRHSHD RPERSGFDLL GVPIVGTSEN LHTAIQATHA
TTVAIGPQMD GETLRRVLWA LEGSDVDVLV SSALTDVTGP RISIRPVAGL PLLHIEEPEL
SGTRRLMKMA FDRIVAGTAI LLFAPLLIGL GLAVRFTSRG PAIFKQIRVG RGGSEFRMYK
FRSMYVDAEQ RKAELESSNE RAEGLLFKMR DDPRITKVGK FLRKWSLDEL PQLFNVVNGS
MSLVGPRPPL PSEVARYEDD VYRRLMVKPG LTGLWQISGR SDLEWNESVR LDLRYVENWS
LAMDFVILWR TLFAVLRREG AY
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