| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5171 |
|---|
| Symbol | |
|---|
| ID | 5673505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 6203249 |
|---|
| End bp | 6205069 |
|---|
| Gene Length | 1821 bp |
|---|
| Protein Length | 606 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641244025 |
|---|
| Product | adenylylsulfate kinase |
|---|
| Protein accession | YP_001509435 |
|---|
| Protein GI | 158316927 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0529] Adenylylsulfate kinase and related kinases |
|---|
| TIGRFAM ID | [TIGR00455] adenylylsulfate kinase (apsK) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0533144 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCCA CCTCCGACAC CGCCGTCGGC TCGTTCGACC CGGATCCGCA TGCCACGGCT
GGTCCGCCCG ACATACCGGG CGCTGGTGAG CAGCGCGGCG CGAACGGCGT CTGTCCGCTT
GCCGTCGTCG CTGCCGACCG CGCCCGCGAG CTGCGGGCCG CCTCGGTGGC CTGGCCGTCG
GTCGTGCTCG ACACGCGCCA GCTCACCGAC CTGGAGCTGA TGCTGCTCGG CGCGTTCGGC
CCGGCGCCGA GCTACTCGGG CCGGGCCCGC CAGCCCGCCG GGCCGCCGGT GCCGAGCCTG
ACCGTCCCCG GTGAGACAGC GGCCGCGCTG GGCCCGGGCA TGGACGTCGC GCTGCGCGAC
CGCGAGGGCG TGATGATCGC GGCCCTGCAC CTGCTCGGTC TGGAGCCCAC CGCGGACGAC
TCACCGACGC CCGCCACCGC GATGCCGGCG GAGGCCTCCG GAACGCCGGC GACTGCCACC
GGGGCGGGCC CGGTGCGCCT GGTCGGCACG GTGGAGGGCC TGGAGCTGCC CAGCCATCCG
GACTACCCGC GGCTACGGCT GACCCCGGAA GGGCTGCGCG CCGAGTTCGT CGCCCGGGGC
TGGGCGACCG GCGCGGGCGC GGCCCCGTGG GCGGTGTGGG CCGACGGCCT GCTGTACACC
GCCGACGTCG GGCGCATCCG CGCGCTGACC CGGCAGGGCA AGCACTGCGT GATCCTGGCC
CCGGTCGGCG GGGCGGACCC GGCCGACGCC GCACACCACC TGCGGGTGCG CTGCCTGCTC
GCCGCGCTGG ACGCGATCGA CGCACCGCCC CGGCCGGCCG AGGCGACGCT GGCCCACGAG
CCGGTCGCCT CCGACGCGGT GTCGCGGGAC GGCGGCCGGA CGCATCCGGC CAGCCCGCCG
GAGCCGGCCC ACACCGCGGC GCTCGCGCCG GAGTCCCGCC GGCACCGCAG CATGCTCGTG
CTGGTCCCGG TCGTCCCGTC GGAGCGGCTC GCCGCGCCCC GTGAGCCGGC GATGAGCGCG
ACCGCCCCGG GCGGCCTGGC CGACGAGGCG GCGAGTGAGC CGGCGTTGGA CGAGATCGCC
GAACTCACCG CCCTGCGGGC CCATCTCGCC GAGGTCTACG GCTGTGCCGG CAGCCTGACC
GGGCCGGCGA TCGGCGCGCC GGGCGCCGAC GATCTCACGA CCCTGCTCGA CGCGGGTGTG
CCGCTGCCCG CCGAGCTCAC CCCGCCCGCG GTGGCTGCCG AGCTGACCCG CGCGGTTCCC
CCGCGCCGCC AGCGCGGCCT GACGATCCTG TTCACCGGGC TGTCCGGCTC GGGCAAGTCG
ACCCTGGCGG GTCTGTTGGT GTGCCGGCTG CTCGAACGGG GCCGGCGGGT CACCCTGCTC
GACGGCGACA TCGTGCGGAC GCATCTCTCC CAGGGCCTGG GCTTCTCCCG CGCCGACCGG
GACACGAACG TGCGCCGCAT CGGCTTCGTC GCCGCGGAGG TCGCGGGCGC CGGCGGGATC
GCCGTGTGCG CGCCGATCGC GCCCTACGAC GACGTCCGCG CCCAGGTGCG GGCGATGACC
ACCGCCCGCG GCGGCGGCTT CGTGCTCGTG TACGTGTCGA CCCCGCTGGA GGTGTGCGAG
GCACGGGACC GCAAGGGCCT CTACGCCAAG GCCCGGGCGG GGGTGATCCC CGCCTTCACC
GGCGTCTCCG ACCCGTACGA GGAGCCGGCC GACGCCGACG TGGTGGTCGA CACGGCGGGC
CTGCCGACCG AGCAGGCCGT CGACCGGGTG CTCGCGCACC TGGTCGAGGC CGGCTGGGTC
GAGGGCGCCC GCGGCCAGTA G
|
|---|
| Protein sequence | MSATSDTAVG SFDPDPHATA GPPDIPGAGE QRGANGVCPL AVVAADRARE LRAASVAWPS
VVLDTRQLTD LELMLLGAFG PAPSYSGRAR QPAGPPVPSL TVPGETAAAL GPGMDVALRD
REGVMIAALH LLGLEPTADD SPTPATAMPA EASGTPATAT GAGPVRLVGT VEGLELPSHP
DYPRLRLTPE GLRAEFVARG WATGAGAAPW AVWADGLLYT ADVGRIRALT RQGKHCVILA
PVGGADPADA AHHLRVRCLL AALDAIDAPP RPAEATLAHE PVASDAVSRD GGRTHPASPP
EPAHTAALAP ESRRHRSMLV LVPVVPSERL AAPREPAMSA TAPGGLADEA ASEPALDEIA
ELTALRAHLA EVYGCAGSLT GPAIGAPGAD DLTTLLDAGV PLPAELTPPA VAAELTRAVP
PRRQRGLTIL FTGLSGSGKS TLAGLLVCRL LERGRRVTLL DGDIVRTHLS QGLGFSRADR
DTNVRRIGFV AAEVAGAGGI AVCAPIAPYD DVRAQVRAMT TARGGGFVLV YVSTPLEVCE
ARDRKGLYAK ARAGVIPAFT GVSDPYEEPA DADVVVDTAG LPTEQAVDRV LAHLVEAGWV
EGARGQ
|
|---|
| |