Gene Franean1_5170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5170 
Symbol 
ID5673504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6202320 
End bp6203213 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content77% 
IMG OID641244024 
Productinositol monophosphatase 
Protein accessionYP_001509434 
Protein GI158316926 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0144285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG ACGACATCCG CCGGCCGGAC GGGTTCGCCA CGGTTCCGGT CGACATCGCC 
ACGGATGAGC TCAGCGATGC CACGCTGGCC GTCCGGCTGG CCACTGACGC GGGCAAGCTG
CTCCTGCGGA TCAGGGCCGA ACTGGGATTC GCCGAACCGG CGACCCTGCG CGAGACCGGC
GACGCCCGGT CGCACCGGCT GCTGGCCCGT GCCCTCGGCC GTCACCGGCC GGGCGATGCG
GTGCTCTCGG AGGAGGCGGC GGACGATCCG GTGCGGCTGG GCGCGGACCG GGTGTGGATC
GTCGACCCGC TCGACGGCAC CCGTGAGTTC GCCGAGCCGG GGCGGACCGA CTGGGCCGTG
CACGTCGCGC TGTGGGAACG GGGCGAACTG ACCGTCGGGG TCGTGGCGCT GCCCGCGCTG
GGCGTGACGC TCTCGAGCGA GGGCCCGCTC CCCGCCCGGG CGCTCCCGGC GGCACGCGGG
GCCGGCGCGG TGGCCGCGGG CCCCGCGGGG AACAGGGGGA TCCCGGCCGG CCCGGTGGCC
CCGGCGGGCG CCGATGCCGC GGTGCCGCGC ATCGTCGCGA GCCGGACGCG GGCGCCGCGG
GTCGTCACCG ACGTGGCCGA GAAGCTGGGC GCGACCGTGC TGCCGATGGG GTCCGCCGGG
GCTAAGGTGG CCGCGGTCAT CCGCGGCGAC GCCGACATCT ACGTCCACGA CGGCGGGCAG
TACGAGTGGG ACTCCGCGGC GCCGGTGGCC GTCGCGCGGG CGGCCGGCCT GCACACCAGC
CGTCTCGACG GGTCGGAGTT GCGCTACAAC CAGCCCGACC CGCTGTTGCC CGACCTGGTC
GTGTGCGATC CCGCCCACGC CGAGCAGGTG TTGGCCGTGA CCCGCGCGCG CTGA
 
Protein sequence
MSTDDIRRPD GFATVPVDIA TDELSDATLA VRLATDAGKL LLRIRAELGF AEPATLRETG 
DARSHRLLAR ALGRHRPGDA VLSEEAADDP VRLGADRVWI VDPLDGTREF AEPGRTDWAV
HVALWERGEL TVGVVALPAL GVTLSSEGPL PARALPAARG AGAVAAGPAG NRGIPAGPVA
PAGADAAVPR IVASRTRAPR VVTDVAEKLG ATVLPMGSAG AKVAAVIRGD ADIYVHDGGQ
YEWDSAAPVA VARAAGLHTS RLDGSELRYN QPDPLLPDLV VCDPAHAEQV LAVTRAR