| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5160 |
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| Symbol | |
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| ID | 5675755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6184875 |
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| End bp | 6185750 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641244014 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_001509424 |
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| Protein GI | 158316916 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0130951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGGT ACACGCCAAG GAGAGTTTCG CCCTACGTGC TGCTCGGCGT GGCATCCCTG
GTCGCCATCG CTGTCGCGCT GGCCGGGATG GCCTTCTGGC CCGGGTCGTC GGATCCACCC
CGGCCGCCCC AGGCGGCATC CACGGCGGTG CCCCTGCGTG ATCCCCATGC GCTGACCGGG
CGGACGATCG TGCTCGACCC GGGCCACAAC GGCGGGAACG GTGCCGCGGG ATCGGCCATC
AACCGCCTCG TCGACGCCGG CGGGTTCCAG AAGGAATGCG ACACCGCCGG TGCGGAGACC
GACGCCGGAT ATCCGGAGCA CGCATTCACC TTCGACGTGG CGACCCGGGC CGCGGGCCTG
CTGCGCTCGC GCGGGGCGAC GGTGATACTC ACCCGCAATG ACGACACGGG CGTCGGTCCC
TGCGTCGACG AGCGGGCCCG GATCGGAAAT GCGGCCGGCG CGGAGGCTGT GGTCTCCATT
CACGCCGACG GCGGGCCGTC CGAAGGCAGC GGATTTCACG TCATCGCGCC TGCGGCCAGT
CCGGACGGTG GAAACGGGGG CATTCTCACC GCCTCGGCGC GGCTGGCGGA TCTGCTGCGA
GGCACCTTCG GTGCGGCGAC CGGCCAGCGT CGGGCGGACT ATCTGGGAGA TGACGGGATC
ACGGTCCGCT CGGATCTCGG CGGGCTCAAT CTCTCCCGTG TTCCCAAGGT TTTCCTCGAG
TGCGGAAACA TGCACAACCC GGGCGACGCC GGGCGGATCA GCGACGCTGC CTGGCGGCAG
CGGGCGGCCG AGGGCATCGT TGACGGCCTC GCGGCCTTCC TGGTCAGCGC CCCGTCCGGC
GCCTCGACCG GCGTGGCCAG GCCGGCCACG GGCTAG
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| Protein sequence | MPRYTPRRVS PYVLLGVASL VAIAVALAGM AFWPGSSDPP RPPQAASTAV PLRDPHALTG
RTIVLDPGHN GGNGAAGSAI NRLVDAGGFQ KECDTAGAET DAGYPEHAFT FDVATRAAGL
LRSRGATVIL TRNDDTGVGP CVDERARIGN AAGAEAVVSI HADGGPSEGS GFHVIAPAAS
PDGGNGGILT ASARLADLLR GTFGAATGQR RADYLGDDGI TVRSDLGGLN LSRVPKVFLE
CGNMHNPGDA GRISDAAWRQ RAAEGIVDGL AAFLVSAPSG ASTGVARPAT G
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