| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5156 |
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| Symbol | |
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| ID | 5673490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6178900 |
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| End bp | 6179589 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641244006 |
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| Product | histidine triad (HIT) protein |
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| Protein accession | YP_001509420 |
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| Protein GI | 158316912 |
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| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00760567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000469823 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGATCGGCG GCGGCGGGAC GGGGCTCGCG GGGCGCGGGA GGCGGCAGCG TGGTGAGGGT
GGCGCAGGTC GGAGGGCGGT GCTGGCGGGA GCCGATCCCG TCGGCGGCGG GGCCGGGCAG
GTGAGCGCGA CCGCGGCGCC GGACGGCACG CCCGTCGACG AGCAGGCTGG TGTCGGCCAT
CCGGACGCCT TCCAACGTCT CTACACGCCG CATCGCATGG CGTACATCAA GGGGGCGGGG
CGGTCCCCCG ACGACGAGTG CCCCTTCTGC GCCATCGTGG CGATGACGGA CGAGGACGGC
CTCGTGGTCG CCCGGGGAAA GTCCGTATAC GTCGTACTTA ATTTGTATCC ATACAATGCG
GGTCATTTGA TGGTGGTGCC GTACCGCCAT GTCGCCGACT ATGCCGAGAT GGACTACGAC
GAGACGGTGG AGATGTCGTT GTTCGTCCAG CACGCGTTGC GCGCGTTGCG GATGGCCAGT
GGCGCGCACG GCTTCAACAC CGGTATGAAC CTCGGTTCGG TGGCCGGCGC CGGAATCGCC
GCCCATGTGC ACCAGCATGT TGTTCCGCGC TGGGGCGGTG ACACGAACTT CATGCCCGTC
GTCGGCGCGA CCCGGGTGTT GCCGGCGCTG CTCGGCCAGA CGCGGGAGCT GCTCGCGCAG
GCGTGGCGGC GCACCGAGCA GACGGCCTGA
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| Protein sequence | MIGGGGTGLA GRGRRQRGEG GAGRRAVLAG ADPVGGGAGQ VSATAAPDGT PVDEQAGVGH
PDAFQRLYTP HRMAYIKGAG RSPDDECPFC AIVAMTDEDG LVVARGKSVY VVLNLYPYNA
GHLMVVPYRH VADYAEMDYD ETVEMSLFVQ HALRALRMAS GAHGFNTGMN LGSVAGAGIA
AHVHQHVVPR WGGDTNFMPV VGATRVLPAL LGQTRELLAQ AWRRTEQTA
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