Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5152 |
Symbol | |
ID | 5673486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6173266 |
End bp | 6174399 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641244002 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001509416 |
Protein GI | 158316908 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.011173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000105469 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGAGAATCG GACTCGCCTG CCCCTACACC TGGGACGTGC CCGGGGGCGT CCAGGCGCAC GTGCGTGACC TCGCCGAGAC GTTGCTCGAC GCCGGGCACG AGGTCTCGGT GATCACCCCG GTGGACGACG AGTCCACGCT GCCGGCGTAC GCCGTGGACG CCGGCCGCGC GGTGCCGGTG CCCTACAACG GCTCGGTGGC CCGGCTGCTC ATGGGGCCGG TCTCGGCCGC CCGGGTGCGT CGGTGGCTGC GCGAGCACGA CTTCGACGTG CTGCACGCGC ACGAGCCGAC CGCGCCCAGC GTCAGCCTGC TGGCCTGCAT GCTCGCGGAC GGTCCGCTGG TGGCGACCTT CCACACCGCC AACCCCAGGT CAAGGATCCT CACCGCGGGG CACCGCGCGC TGCAGCCGTC GCTGGAGAAG CTGCGGGCGC GGATCGCGGT CTCCGAGGCG GCGCGGCGCA CGCTCGTGGA GCACCTCGGC ACCGGCGCGA TCCTCATCCC GAACGGAGTG GCCGTGCGGG CCTTCGAGGG CGCCCGCCCG CTGCCCGGCT ACGGCACCGC GCCGACGGTG GCGTTCCTCG GCCGGATCGA CGAGCCGCGC AAGGGCCTGG ACGTGCTGAT GGCGGCGTTC CCGATGCTCG TCGAGAAGGT GCCGGACGTC CGCCTGCTGG TCGCGGGCCC CGGCGACACC GAGGCGGTGC GCGCGCGCAT CGACCCCGCG CTGCTCGGCC GGGTCGATCT GGTCGGGCTC GTCCCGGAGG CCGACAAGGC CGCGGTGTTC GCCTCCGGCA GCGTGTACTG TGCCCCGAAC ACAGGGCAGG AGAGCTTCGG GATCGTGCTG CTCGAGGCGA TGGCGGCCGG GACGCCGGTC GTCGCGAGCG ACATCGACGC GTTCCGGCGG GTGCTCGATA ATGGGCGGGC CGGGCGGTTG TTCGGGGTGG GGGAACCGGC GGAGCTGGCG GCGAACCTGG CCGAGCTGAT CGAGGACCCG GCCGAGCGAG CCCGGCTGGC CGAGCGCGGC CGCGCCGTCG TCGCCCGGTA CGACTGGCGG GTGATCGCCC AGAGCATCGT CGGCGTGTAC GAGATGGTCT CCGGCGACCG CCCGGTGTCG GTCGCCGCCC CCGAGGAGAG CTGA
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Protein sequence | MRIGLACPYT WDVPGGVQAH VRDLAETLLD AGHEVSVITP VDDESTLPAY AVDAGRAVPV PYNGSVARLL MGPVSAARVR RWLREHDFDV LHAHEPTAPS VSLLACMLAD GPLVATFHTA NPRSRILTAG HRALQPSLEK LRARIAVSEA ARRTLVEHLG TGAILIPNGV AVRAFEGARP LPGYGTAPTV AFLGRIDEPR KGLDVLMAAF PMLVEKVPDV RLLVAGPGDT EAVRARIDPA LLGRVDLVGL VPEADKAAVF ASGSVYCAPN TGQESFGIVL LEAMAAGTPV VASDIDAFRR VLDNGRAGRL FGVGEPAELA ANLAELIEDP AERARLAERG RAVVARYDWR VIAQSIVGVY EMVSGDRPVS VAAPEES
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