| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5149 |
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| Symbol | |
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| ID | 5673483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6170058 |
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| End bp | 6171023 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641243999 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_001509413 |
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| Protein GI | 158316905 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0075588 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000117077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATGTCCG ACGGCCTGAC CGCCCCCGCC CCCGCCCCGG GCGCTTCGCC ATCCGGCCCC
GTCGCGCCGG CGGACGGCGC GGAGCGGCAC GCCGGCACCG CCCGGGTCAA GCGCGGCATG
GCGGAGATGC TCAAGGGCGG CGTCATCATG GACGTCGTCA CCCCCGAACA GGCCCGCATC
GCCGAGGAGG CGGGCGCCGT CGCGGTCATG GCGCTGGAGC GGGTGCCCGC GGACATCCGG
GCGCAGGGCG GCGTGGCGCG GATGAGCGAC CCCGACATGA TCTCCGGGAT CATCGAGGCG
GTCTCGATCC CGGTCATGGC CAAGGCCCGC ATCGGGCACT TCGTCGAGGC GCAGATCATC
CAGGCGCTGG GTGTGGACTA CGTCGACGAG TCCGAGGTCC TCACCCCGGC GGACCCGAAC
CACCACATCG ACAAGTGGGG CTTCACGGTT CCCTTCGTCT GCGGAGCGAC GAACCTGGGC
GAGGCGCTGC GGCGGATCTC CGAGGGTGCC GCGATGATCC GCTCGAAGGG CGAGGCGGGT
ACCGGCGAGG TCTCCAACGC CGTGGTGCAC ATGCGTACGA TCCGGTCGGA GATCGCGCGG
CTGTCGGGGC TGCCGTCCGA GGAGCTCTAC GCCGCGGCCA AGGAGCTGCG TGCGCCGGTG
GAGCTCGTCA CCGAGGTCGC GCGGCTGGGT CGGCTGCCGG TCGTGCTGTT CACCGCGGGC
GGCATCGCCA CCCCGGCCGA CGCGGCGCTG ATGATGCAGC TCGGCGCGGA CGGCGTGTTC
GTCGGCTCCG GCATCTTCAA GTCCGGCGAC CCGGCGCGGC GCGCCCGGGC GATCGTCGAG
GCCACGACCA TGTACAACGA CCCCGGCGTG CTGGCGAAGG TGTCGCGCGG CCTCGGTGAG
GCCATGGTCG GCATCAACGT CGGCGAGCTC CCGCCCGAGG CGCGCTTCGC CGCCCGCGGC
TGGTGA
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| Protein sequence | MMSDGLTAPA PAPGASPSGP VAPADGAERH AGTARVKRGM AEMLKGGVIM DVVTPEQARI
AEEAGAVAVM ALERVPADIR AQGGVARMSD PDMISGIIEA VSIPVMAKAR IGHFVEAQII
QALGVDYVDE SEVLTPADPN HHIDKWGFTV PFVCGATNLG EALRRISEGA AMIRSKGEAG
TGEVSNAVVH MRTIRSEIAR LSGLPSEELY AAAKELRAPV ELVTEVARLG RLPVVLFTAG
GIATPADAAL MMQLGADGVF VGSGIFKSGD PARRARAIVE ATTMYNDPGV LAKVSRGLGE
AMVGINVGEL PPEARFAARG W
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