| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5147 |
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| Symbol | |
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| ID | 5673481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6168698 |
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| End bp | 6169453 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641243997 |
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| Product | hypothetical protein |
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| Protein accession | YP_001509411 |
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| Protein GI | 158316903 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000302619 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000117077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCGGTC ACTCCAAGTG GGCGACCACC AAGCACAAGA AGGCGGTCGT CGACGCCCGC
CGGGGCAAGC TGTTCGCCAA GCTGGTCAAG ACCGTCGAAG TCGCGGCCAA GACGGGCGGC
GGCGACCCGG CCGGCAACCC GACACTGGCG GACGCGATCG CCAAGGCGAA GTCCCAGTCG
GTGCCGAACG ACAACATCGA ACGGGCGATC AAGCGTGGCT CCGGCGAGCT CGCCGGCGGG
GTGAGCTACG AGTCGGTCAC CTACGAGGCC TACGGGCCGA ACGGGGTCGC CGTGCTCGTC
GAGTGCCTCA CCGACAACCG CAACCGGGCC GCCTCCGACG TCCGGGTCGC GATCACCCGC
AACGGCGGCA CCCCCGCCGA CCCGGGCTCG GTGTCGTACC TGTTCAACCG CAAGGGCGTC
GTCCTGATCG ACAAGACGCC CACCCTCACC GAGGACGACA TCCTCCTGGC CGTGCTGGAC
GCCGGGGCGG AGGAGGTCAA CGACGTCGGG GAGGCGTTCG AGGTCGTCTC CGAGGCCACC
GACCTGCACG CCGTGCGGGT GGCGGCGGCG GAGGCCGACC TGACGGTCGC CTCGGCGGAC
ATCTCCTGGC TGCCCTCGGT GAGCGTCCCG CTCGACGCGG AGCCGGCCCG GAAGGTCCTC
AAGCTGGTCG AGGCGCTCGA GGATCTCGAC GACGTCCAGA ACGTCTGGTT CAACGCGGAC
ATCTCCGACG ACGTGATGGA GCTCGTCTCC AGCTGA
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| Protein sequence | MSGHSKWATT KHKKAVVDAR RGKLFAKLVK TVEVAAKTGG GDPAGNPTLA DAIAKAKSQS
VPNDNIERAI KRGSGELAGG VSYESVTYEA YGPNGVAVLV ECLTDNRNRA ASDVRVAITR
NGGTPADPGS VSYLFNRKGV VLIDKTPTLT EDDILLAVLD AGAEEVNDVG EAFEVVSEAT
DLHAVRVAAA EADLTVASAD ISWLPSVSVP LDAEPARKVL KLVEALEDLD DVQNVWFNAD
ISDDVMELVS S
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