| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5146 |
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| Symbol | ruvC |
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| ID | 5673480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6168046 |
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| End bp | 6168582 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641243996 |
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| Product | Holliday junction resolvase |
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| Protein accession | YP_001509410 |
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| Protein GI | 158316902 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0817] Holliday junction resolvasome, endonuclease subunit |
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| TIGRFAM ID | [TIGR00228] crossover junction endodeoxyribonuclease RuvC |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00188604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000100944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCGTGTTC TCGGAGTCGA CCCGGGGCTG ACCCGCTGCG GCCTCGGGGT GGTCGACGGC
GGCCCCGGCC GCCGGGCCAG CCTGGTCGAG GTCGGCGTGG TGCGCACGCC CGCCTCGGAC
GAGGTGGCCG ACCGGCTGCG GGCCGTCTCC GAGGGCGTGG ACGAGTGGCT GGACCGGGTC
CGCCCGGACG CGGTCGCGGT CGAGAAGGTT TTCAGCCAGG CCAACGTGCG CACGGTGATG
GGCACCGCGC AGGCCGGCGC GGTGGCCATC GTCGCCGCGG CCCGGCGCGG GCTGCCGATC
GGTCTGTACA CGCCGAGCGA GGTCAAGGCC GCCGTCACCG GCAGCGGGCG CGCGGACAAG
GCCCAGGTGG GGTTCATGGT GACGAAGCTG CTGGATCTTC CGGAGGCGCC GCGCCCGGCG
GATGCCGCCG ACGCGCTCGC CCTGGCCCTG TGCCACCTGT GGCGCGGGCC GGCACTGGCC
CGGATGCGCG CCGCGACCCC CGCGCGGAGC CCGGGCGTGC CGGGTGGCCG GCGATGA
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| Protein sequence | MRVLGVDPGL TRCGLGVVDG GPGRRASLVE VGVVRTPASD EVADRLRAVS EGVDEWLDRV
RPDAVAVEKV FSQANVRTVM GTAQAGAVAI VAAARRGLPI GLYTPSEVKA AVTGSGRADK
AQVGFMVTKL LDLPEAPRPA DAADALALAL CHLWRGPALA RMRAATPARS PGVPGGRR
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