Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5134 |
Symbol | |
ID | 5673468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6150629 |
End bp | 6151489 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641243984 |
Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
Protein accession | YP_001509398 |
Protein GI | 158316890 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.945957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0653768 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGAGCA CGAAGGAACG GCGGCAGCGC GAGATAGCCG CCGCGCGGGC GGCGCGCCAG GCGCAGCGCC GCCGCCAGGC GTACCAGCGA CGGCAACGCC GCCTGACGAT CGTCGCGGCG GTGGCCGTGG TGGCCATCGT CGGCTCGGTG ATCGCCGCGG TCCTGCTCAG CGGCGGCGGG GACAACGACA ATCTCAGCGC GACCGATCCC GCGGCCAACC CGTCGGCGTC GGCGGCACCG GCGGTGCCGG CCGGGCAGAC GAGCAAGGTC GGCGACTGCG TCTACACCTC GAGCGGCGAG TCGCCGTCCC GCCCGGTGGG GCTCCCGACG GCCGCCGCCA CGGTGAGCAA GGCCCCCGCC ACCATGGTCA TCACCACCGA CCAGGGCACG ATGACGGCCG CGCTCGACGC GGACAAGGCT CCCTGCACGG TGAACGCGCT GCGCACGCTC GCCGAGGCGG GCTTCTACAA CGACACCGCC TGCCACCGGC AGACGGGTGG CGCCGACGCC GGCATCAACG TGCTGCAGTG CGGGGACCCG ACCGGCAGCG GGACGGGCGG CCCAGGCTTC GGCTACGCCA ACGAGAACAC CGAGGGCGTG AACTACAACC GGGGTGTCCT GGCCATGGCG CACAGCAGCC AGCCGGACAG CAACGGCAGC CAGTTCTTCA TCAACTACGC CGACCCGAGC CAGCAGGGCG CCGCGGCGCT CGCCGGCGGC TACACCGTCT TCGGCCACAT CACCGAGGGC CTCGACGTCC TGGACAAGCT GACGTCCCCG GGTGTCGAGG GCGGCGGGTC GGACGGCGCG CCGGCCAGCA AGCCGCAGAT CAAGTCGATC GAGATCACCC AGGGGCCCTG A
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Protein sequence | MSSTKERRQR EIAAARAARQ AQRRRQAYQR RQRRLTIVAA VAVVAIVGSV IAAVLLSGGG DNDNLSATDP AANPSASAAP AVPAGQTSKV GDCVYTSSGE SPSRPVGLPT AAATVSKAPA TMVITTDQGT MTAALDADKA PCTVNALRTL AEAGFYNDTA CHRQTGGADA GINVLQCGDP TGSGTGGPGF GYANENTEGV NYNRGVLAMA HSSQPDSNGS QFFINYADPS QQGAAALAGG YTVFGHITEG LDVLDKLTSP GVEGGGSDGA PASKPQIKSI EITQGP
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