Gene Franean1_5134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5134 
Symbol 
ID5673468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6150629 
End bp6151489 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content73% 
IMG OID641243984 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_001509398 
Protein GI158316890 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.945957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0653768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGAGCA CGAAGGAACG GCGGCAGCGC GAGATAGCCG CCGCGCGGGC GGCGCGCCAG 
GCGCAGCGCC GCCGCCAGGC GTACCAGCGA CGGCAACGCC GCCTGACGAT CGTCGCGGCG
GTGGCCGTGG TGGCCATCGT CGGCTCGGTG ATCGCCGCGG TCCTGCTCAG CGGCGGCGGG
GACAACGACA ATCTCAGCGC GACCGATCCC GCGGCCAACC CGTCGGCGTC GGCGGCACCG
GCGGTGCCGG CCGGGCAGAC GAGCAAGGTC GGCGACTGCG TCTACACCTC GAGCGGCGAG
TCGCCGTCCC GCCCGGTGGG GCTCCCGACG GCCGCCGCCA CGGTGAGCAA GGCCCCCGCC
ACCATGGTCA TCACCACCGA CCAGGGCACG ATGACGGCCG CGCTCGACGC GGACAAGGCT
CCCTGCACGG TGAACGCGCT GCGCACGCTC GCCGAGGCGG GCTTCTACAA CGACACCGCC
TGCCACCGGC AGACGGGTGG CGCCGACGCC GGCATCAACG TGCTGCAGTG CGGGGACCCG
ACCGGCAGCG GGACGGGCGG CCCAGGCTTC GGCTACGCCA ACGAGAACAC CGAGGGCGTG
AACTACAACC GGGGTGTCCT GGCCATGGCG CACAGCAGCC AGCCGGACAG CAACGGCAGC
CAGTTCTTCA TCAACTACGC CGACCCGAGC CAGCAGGGCG CCGCGGCGCT CGCCGGCGGC
TACACCGTCT TCGGCCACAT CACCGAGGGC CTCGACGTCC TGGACAAGCT GACGTCCCCG
GGTGTCGAGG GCGGCGGGTC GGACGGCGCG CCGGCCAGCA AGCCGCAGAT CAAGTCGATC
GAGATCACCC AGGGGCCCTG A
 
Protein sequence
MSSTKERRQR EIAAARAARQ AQRRRQAYQR RQRRLTIVAA VAVVAIVGSV IAAVLLSGGG 
DNDNLSATDP AANPSASAAP AVPAGQTSKV GDCVYTSSGE SPSRPVGLPT AAATVSKAPA
TMVITTDQGT MTAALDADKA PCTVNALRTL AEAGFYNDTA CHRQTGGADA GINVLQCGDP
TGSGTGGPGF GYANENTEGV NYNRGVLAMA HSSQPDSNGS QFFINYADPS QQGAAALAGG
YTVFGHITEG LDVLDKLTSP GVEGGGSDGA PASKPQIKSI EITQGP