| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5132 |
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| Symbol | |
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| ID | 5673466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6147949 |
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| End bp | 6148929 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641243982 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_001509396 |
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| Protein GI | 158316888 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.126114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.060719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGCC TGCGCAGCGA GCTGGATGCG GCCGGCATCA CCGATCCGCG CCTGCGGAGC
TCCTACCGCG CCGCCCGCGA GCTGAACGCC GTCCACGGGC GCACCTACTA CCTGGCGACC
CTCCTGCTGC CACGGTGGAA GCGCCCGCAC GTCCACGCCC TGTACGGCTT CGCGCGGTAC
GCCGACGAGA TCGTGGACGA CCTCGACTCG ACGCTGACCG ACGAGGCGAA GGCACAGTGG
CTGCGACAGT GGGGCAACCG CTTCCTCACC GCACTCGCCA CCGGCTCGGA CGAGGCCGGG
GCCGGGGCCG ACAGGAGCGG GGCAGGCTCC GTCGGTGCCG GGGATGCCGG GGTGCTGCCA
GCCGTCCTGC ACACGATTCG GCGTTTCGAC CTGCCGGTCG CGTACTTCGA GGCCTTCCTG
ACCTCGATGG CGATGGACCT GACCGTCACC GGCTACGCCA CCTGGGACGA CCTCATGGTC
TATGTCCACG GCTCGGCGGT GGTGATCGGC CTGCAGATGC TGCCCATCCT CGAGCCCGTC
GACGCCTCGG CGGAACCGTA CGCCCGCGAC CTCGGCGCCG CCTTCCAACT CGCGAACTTC
CTCCGCGACG TCGGGGAGGA CCTGCGCCGC GGCCGCGTCT ACCTTCCGCA GGCGTCCCTG
GACCTGTTCG GAGTCACCAG GGAGCGCCTC GCCACCGGGG TGGTCGACGG CCCCGTCCGC
CGGCTGCTGA CCCACGAGAT CGCCCGTGCG CGGGAGCTGT TCCGCTCGGC CCGACCGGGC
ATCCGGCTGC TGCACCCGAC GTCCCGCGAC TGTGTCTGGA CCGCGTTCCA CCTCTACGGC
GACATCCTGG ACGAGATCGA ACGCGCCGAC TACCAGATCC TCGACCGACG GGTATCCGTC
GGCCTGGGCC GCCGCCTCAC CGTCGCGACC CCGGCCCTGA TCCGCGCCAC CCGCTCCCGC
CGCCATCCCT CGACGAACTA A
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| Protein sequence | MSGLRSELDA AGITDPRLRS SYRAARELNA VHGRTYYLAT LLLPRWKRPH VHALYGFARY
ADEIVDDLDS TLTDEAKAQW LRQWGNRFLT ALATGSDEAG AGADRSGAGS VGAGDAGVLP
AVLHTIRRFD LPVAYFEAFL TSMAMDLTVT GYATWDDLMV YVHGSAVVIG LQMLPILEPV
DASAEPYARD LGAAFQLANF LRDVGEDLRR GRVYLPQASL DLFGVTRERL ATGVVDGPVR
RLLTHEIARA RELFRSARPG IRLLHPTSRD CVWTAFHLYG DILDEIERAD YQILDRRVSV
GLGRRLTVAT PALIRATRSR RHPSTN
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