Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5128 |
Symbol | |
ID | 5673462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6142910 |
End bp | 6144430 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641243978 |
Product | zeta-phytoene desaturase |
Protein accession | YP_001509392 |
Protein GI | 158316884 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.146602 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAACAG TGACCGGGCC GACGGACCAC GTCGTCATCG TCGGAGCCGG GCTGGGCGGA CTTTCGGCCG CGCTCCGGCT GACCGGCGCG GGCCGGCGGG TCACCGTCCT GGAACGTGAC GACACCCCCG GTGGGCGCGC GGGGTCGCTG CGGCTGGGCG GCTACCGGTT CGACACCGGG CCGACCGTGC TCACCATGCC GGACCTGGTG GCGGACGCGC TCGACTGCGT GGGCGAGGAC CTCGGCCGGT GGCTGCCACT GCGCCGCCTC GACCCGATGT ACCGGGCCCG CTTCGCGGAC GGGTCCGTGC TGGACGTCCG CGCCGACCCG GAGCACACCG AGCAGGGGGT GCGGGAGCTG TGCGGGCCGG CCGAGGCGGC CGGATTCCGT GACTTCACCC GGTTCGCGAC CCGCATGTTC CAGGCGCAGA TGCGCGACTT CATCGACGCC CAGGTCGACT CGCCGCTGGC GCTGATGCGG CCCTCGCTGG CCCGGGTGGC GGCGCTCGGC GGGTTCCGCC GCCTGGACAC CGTGGTCGGA CGGTACCTTC GCGACCCGCG GACCCGGCGG CTGTTCTCCT TCCAGGCGAT GTACGCCGGG CTCGACCCGC ACGAGGCGCT CGGGCTGTAC GCCGTGATTG CCTACATGGA CTCGGTGGCC GGCGTCTTCC ACGCCGACGG CGGCCCGCAC GCGGTCGCCG CGGCCATGGC CGGGGCGGCG GCCCGGCACG GGGCCACCTT CCGCTATGGC ACCGAGGTGA ACCGGGTGGA GGTCCGCGGC GGGCGGGCGG TCGCCGTGCA CACGACCGCC GGCGAGCGGG TGCCGGCGGA CGTCGTGATC CTCAACCCGG ACCTCCCGGT GGCCTACCGT GACCTGCTGC CCGCCTCCGC CACCCCGGCG CGGCTGGACC GCCTGCGGCA CTCGCCGTCC TGCTTCCTGC TGCTCGCCGG TGCCCGGGGC GCCCACCCGT CCGGCGCGCA CCACACGATC CACTTCGGCG GCGCGTGGCG GCGCACCTTC GACGAGATCA TTCGACGCGG GGAGCTGATG AGCGACCCGT CGTTCCTGGT GAGCACGCCG TCGGTCACCG AGCCGGCGGC CGCGCCGGCG GGCGGGCACA GCTACTACGT CCTGTTCCCC ACCCCGAACC TGACCGCGCC GCTGGACTGG TCGGTCCTCG GCCTGCGGTA CCGCGACGAG GTCGTCGCCA CGCTGGAGCG TGCCGGCTAC CCCGGGTTCG GGACGTCGAT CGACGTCGAG CAGGTGACCA CCCCGGCGGA CTGGCGGGCC CGTGGGATGG CCGCCGGCGC GCCGTTCGCG GCGGCGCACA CCTTCCGCCA GACCGGCCCG TTCCGGCCGT CCAACCTGGC GCCGGGACTG GCCAACGTGG TGTTCGTCGG CAGCGGAACC CGGCCGGGGG TGGGAGTTCC GATGGTGCTG ATATCGGGCC GGCTGGCCGC CGAGCGGGTT CTCGGCCGTG ATCGTGGCTA CCGCACGCGG ACACTGAGGG CTATTCCCTG A
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Protein sequence | MRTVTGPTDH VVIVGAGLGG LSAALRLTGA GRRVTVLERD DTPGGRAGSL RLGGYRFDTG PTVLTMPDLV ADALDCVGED LGRWLPLRRL DPMYRARFAD GSVLDVRADP EHTEQGVREL CGPAEAAGFR DFTRFATRMF QAQMRDFIDA QVDSPLALMR PSLARVAALG GFRRLDTVVG RYLRDPRTRR LFSFQAMYAG LDPHEALGLY AVIAYMDSVA GVFHADGGPH AVAAAMAGAA ARHGATFRYG TEVNRVEVRG GRAVAVHTTA GERVPADVVI LNPDLPVAYR DLLPASATPA RLDRLRHSPS CFLLLAGARG AHPSGAHHTI HFGGAWRRTF DEIIRRGELM SDPSFLVSTP SVTEPAAAPA GGHSYYVLFP TPNLTAPLDW SVLGLRYRDE VVATLERAGY PGFGTSIDVE QVTTPADWRA RGMAAGAPFA AAHTFRQTGP FRPSNLAPGL ANVVFVGSGT RPGVGVPMVL ISGRLAAERV LGRDRGYRTR TLRAIP
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