Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5127 |
Symbol | |
ID | 5673461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6141880 |
End bp | 6142590 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641243977 |
Product | hypothetical protein |
Protein accession | YP_001509391 |
Protein GI | 158316883 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.309204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.127829 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGAGGT CGTGCGGAGG TGTCGTGTCT GATCTCGTCG TCGTCGCGCT CGGCGTCGCG CTGCTGGTGG TGACCGGCAG CGCTCTCATC CTGCTCCGGA TGCCGCCGGA ACGGCTCGAG CGCACGGTCG ACGAGGTGAC GTCCGTGGAG GTCCGGCTCG CCGCCGGCCG GGTCGAGATC GGCGAGTACG ACCGGTCGGA CGTCGCCGTC GAGATCCTCG CGCGCCGTCG ACCCGGGCGG GCGAGGCCGA CCATGACCCG CTCGGGCGGT GTGCTGCGGA TCGACGGACG GACGAGCGAG GTGCTGGCCC GGCTGAAGCT GCCGCGCGGG ACGAAGGCCC GGGCCGAGGT CCGGATGGGG GAGATCACCC TCTGGGGCTC CGCCGGTGAC CTGGTGCTGG TCACCGAGGG CGGCGGCATC ACCGGGCGGG AGCTCTCCGG CGCGCGGGTC AGCGCCCGTA GCCGGACCGG CGACGTCAAC CTGCACTTCG ACGGCCCGCC GGACGACCTG TCCGCGGTCA GCGAGGACGG CATGGTGACC CTCGTGTTGC CCGAGGACGA GTACGGGGTC GAGGCGGAGG CCGGGAACCC GCAGTCCGCG GTCGTCGACC TGCCGAGCGT GCCGGGTGCC GCGCGCCGGG TGCTGGCCCG CAGCGTCGCC GGCAGGATCA GGATCAGGCC CGCGTCACCG CGCGGCCCGG TGCGGATCTA G
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Protein sequence | MRRSCGGVVS DLVVVALGVA LLVVTGSALI LLRMPPERLE RTVDEVTSVE VRLAAGRVEI GEYDRSDVAV EILARRRPGR ARPTMTRSGG VLRIDGRTSE VLARLKLPRG TKARAEVRMG EITLWGSAGD LVLVTEGGGI TGRELSGARV SARSRTGDVN LHFDGPPDDL SAVSEDGMVT LVLPEDEYGV EAEAGNPQSA VVDLPSVPGA ARRVLARSVA GRIRIRPASP RGPVRI
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