Gene Franean1_5127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5127 
Symbol 
ID5673461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6141880 
End bp6142590 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content74% 
IMG OID641243977 
Producthypothetical protein 
Protein accessionYP_001509391 
Protein GI158316883 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.309204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.127829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGAGGT CGTGCGGAGG TGTCGTGTCT GATCTCGTCG TCGTCGCGCT CGGCGTCGCG 
CTGCTGGTGG TGACCGGCAG CGCTCTCATC CTGCTCCGGA TGCCGCCGGA ACGGCTCGAG
CGCACGGTCG ACGAGGTGAC GTCCGTGGAG GTCCGGCTCG CCGCCGGCCG GGTCGAGATC
GGCGAGTACG ACCGGTCGGA CGTCGCCGTC GAGATCCTCG CGCGCCGTCG ACCCGGGCGG
GCGAGGCCGA CCATGACCCG CTCGGGCGGT GTGCTGCGGA TCGACGGACG GACGAGCGAG
GTGCTGGCCC GGCTGAAGCT GCCGCGCGGG ACGAAGGCCC GGGCCGAGGT CCGGATGGGG
GAGATCACCC TCTGGGGCTC CGCCGGTGAC CTGGTGCTGG TCACCGAGGG CGGCGGCATC
ACCGGGCGGG AGCTCTCCGG CGCGCGGGTC AGCGCCCGTA GCCGGACCGG CGACGTCAAC
CTGCACTTCG ACGGCCCGCC GGACGACCTG TCCGCGGTCA GCGAGGACGG CATGGTGACC
CTCGTGTTGC CCGAGGACGA GTACGGGGTC GAGGCGGAGG CCGGGAACCC GCAGTCCGCG
GTCGTCGACC TGCCGAGCGT GCCGGGTGCC GCGCGCCGGG TGCTGGCCCG CAGCGTCGCC
GGCAGGATCA GGATCAGGCC CGCGTCACCG CGCGGCCCGG TGCGGATCTA G
 
Protein sequence
MRRSCGGVVS DLVVVALGVA LLVVTGSALI LLRMPPERLE RTVDEVTSVE VRLAAGRVEI 
GEYDRSDVAV EILARRRPGR ARPTMTRSGG VLRIDGRTSE VLARLKLPRG TKARAEVRMG
EITLWGSAGD LVLVTEGGGI TGRELSGARV SARSRTGDVN LHFDGPPDDL SAVSEDGMVT
LVLPEDEYGV EAEAGNPQSA VVDLPSVPGA ARRVLARSVA GRIRIRPASP RGPVRI