Gene Franean1_5117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5117 
Symbol 
ID5673451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6126737 
End bp6127552 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content78% 
IMG OID641243967 
Producthypothetical protein 
Protein accessionYP_001509381 
Protein GI158316873 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.271026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.649548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCT TCGAGTTCTC GGGCATCGGA GCGGTGACGG GTGCGTCCCG CGGCGGAGCG 
GACGAGGCAC CGGATCACCG CCGCCGTGAC GGCGGCGCGC GGCGGGCGGC CGCGGACCGG
GCTGACGTGA GTCGGGTGGA GGCGGGCCGG GCGGGTGCCG AGGGGGCCTG CGCGGGCCGC
CGCGGGGTGG CGCCCGGCCT CGCCGCGCGG CTCGACGGCC TGCTGCCGCT GGAGGTGGGC
TACGACTTCG TGTCGGGCAC CCGCAACCAG GTGTGGGTGC GCGGTGACCG GGCGGCCGTC
CTCGAGAGGT GGCATCGGGA CGGCGGGGTG GAGCTCATGG CCGCCGGCCG CCCGCTCCGG
CTGGAGTCGG ACCTCGACGG TGTGGGGGTG CGGGTGGTCG ACCCGGTGGC GCGGCTGCCG
CTCGCCGCGT TCCGGCCCCG GCCGCGGGGC GGCCTGGTCG ACCTCGCGGA CGGCTCCACG
CTGCGCTGGC TGCGCCCGCG CCGCCGGGCC GCCGGGTACG TCTTCGAGCG CGGATTCGTC
GGCTGGAAGA ACGCCAACGT GGTCCGGTTC GCGCACGACG GGGTCGCGAT CGTTCTGGTG
GACCCGTCCG ACCTGACGCG CCATCGCCCG CCGGTGGCCC GCCCGGACTT CGGCGCCGGG
ACGGTGGCCG ACCCGCGCCG GGGCTGGGTG CCCGAGGTCA CGGTGCTCGT GCTGCTCGGC
TGGTTCCTCC TGCTGCTGGA GGACGACCCG GTGCCTCCGG CGCCCGCCTA CCCCGATCTC
GACCCGTCCG GGTGGCGCGC CACGCCAGCG GGTTGA
 
Protein sequence
MSIFEFSGIG AVTGASRGGA DEAPDHRRRD GGARRAAADR ADVSRVEAGR AGAEGACAGR 
RGVAPGLAAR LDGLLPLEVG YDFVSGTRNQ VWVRGDRAAV LERWHRDGGV ELMAAGRPLR
LESDLDGVGV RVVDPVARLP LAAFRPRPRG GLVDLADGST LRWLRPRRRA AGYVFERGFV
GWKNANVVRF AHDGVAIVLV DPSDLTRHRP PVARPDFGAG TVADPRRGWV PEVTVLVLLG
WFLLLLEDDP VPPAPAYPDL DPSGWRATPA G