| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5104 |
|---|
| Symbol | |
|---|
| ID | 5673439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 6110573 |
|---|
| End bp | 6113092 |
|---|
| Gene Length | 2520 bp |
|---|
| Protein Length | 839 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641243955 |
|---|
| Product | peptidoglycan glycosyltransferase |
|---|
| Protein accession | YP_001509369 |
|---|
| Protein GI | 158316861 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0680145 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0778516 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCAGA CGACCCGCGG TCCGTCCTCC GGCCGCGGTC GGAACCGACT CCGTCTCGTC
ACGAACCCGC ACCCGGGGAG CCCGGACTCG CGGTCCGCGC GCCACGACGG TGACGACCTG
CTCGATCCGT CCGTGCGCCG GTTCTCCGGC CGTGACCCGG ACGGCGGCCG CGGCCGGATG
ACCCCGCCCC CCCGCGGCGG CGACCGACAC GGTGACGACC GGCGCGGCTA CGACGCTGCC
CGGCCTCGAA ACGACCGGCG CCAGGACGCC CGCCGCCGCG ACGACCGCGA CGACCGCGAC
GACCGCGACG ACCGCGACGA CCGCGACGAC CGCGACGACC GCGACGACCG CGACGACCGC
GACGAGCTTG ACGAACAGAC CTGGGACGAC GCCGCCGCCG AAGCCACGGA ACGGGCGGCG
CGCCGTCCCC GGCCCCGCCC CGCCGCGGCC GGACGGGAGC GCCGGGCGGC GACGGCCCGG
GCGGGTCGGT CGTCCCCACG GGTGTCTCCG CTGCGCAGCG CGGCCGCCGG CTCGGCGACG
CCACGTGAGC AGCTCCGCCG GGACCAGGCC GCCCGCGCCA CATCCGCCCG TACGACCTCC
GCCCGCGGGG CGGCCGGCCG GCGTAACCCG ACCCGGGGGG CGGCCAGCCG GACGACGTCC
GGGCGGATCC CCCCCGTCCG GCGCCCGCAT CCCTCGAGCG GTGGGGCGGG CCGCAACCGG
GCCACCTCGA TCCGGCGCGG CCTCGGGGGC GCGCCGCCGC GGCCGCCGCG GCCGTTCGTC
CTCGCCAGCC CCCGCCGCCG GGTCCGGGTG TCGGTGGTAC TGATGATCGC CGTCCTGGTC
GTGATCGCCG GCCGGCTCGC GCAGCTGCAG GGCTTCGCCT CGTCCAACTA CGCGGAGCAG
GCCGAGCAGC AGCGGCTGCG CAAGTCCGTC CTGCCCGCCG ACCGCGGCAT GATCACCGAC
CGGCACGGCG ACGCGCTGGC GCAGGACGTC GAGCGCCGGG CCGTGTACGC GGACCCGTGG
CTGATGAACG AGGCCCAGGT CGTCGACGCG GCGCGCAAGC TGGCCCCGCT GCTCGGCGAG
TCCGAGAACA CGCTGCGCAA GAGCATGACG TCCAACGATC CCAAGGTGCG GTTCGTGTAC
CTGGGCCGTC GCCTCGACCG GGCGGTCGGG GACGAGGTGG ACAAGCTGGG CCTGCGCGGC
ATCGGCGTCC TCCCCGAGCG GGGGCGCTGG TACCCGTCGC TGACCCTGGG CGCCAACTTC
GTCGGCTTCA CCAAGCTCGG CGAGAACGAC GCGATCGTGG GCGCCGGCGG CCTGGAGCTG
GCCTACGACA GCGTGCTGCG CGGGACGGAC GGGCGCCGCC AGATCGAGGC CGACCCGTCC
GGGCGGGAGA TCCCCTCGGC ACAGAGCGTG GAGAAGGACC CGGTCAGCGG CTCCACACTG
CGCCTCACCA TCGACAACTA CATCCAGTGG GACGCCCAGA GCGCGATCGC TGAGGCGGTG
CGGACCTCGG AGGCGGACGG CGGCACGATC GTCGTGATGA ACCCGAAGAC GGGTGACCTG
CTCGCGATGG CCGACGCGCC CCAGTTCGAC CCGAACAACA TCACCTCCCG GGACATCGAC
GCGATCGGGA ACCGCTCGAC CGGCCAGGCC TTCGAGCCCG GCAGCGTCAA CAAGGTCATC
ACCATGGCCG CGGCACTTGA CCGGAACCTG ATCGAGACGA CGACCCCGAT CACCGTGCCG
CCGTCCATCG AGCGGGGCGG GGTGACGATC ACGGACTCGG AGCCGCACGG CACCGAGCAC
CTCACCGCGG CCGGCGTGCT CGCCCGGTCC AGCAACATCG GGACGGTGCT AGTCGCCGAG
CGGGTCGGCA ACGACAACCT CGAGCAGATG ATGCGCGCGT TCGGGCTCGG CAAGGCGACC
GAGGTCGACT TCCCCGGTGA GACCGCCGGC ATCCTGCCGC CGGCCGCGGA CTGGTCGGGC
AGCCAGGCCG CGACCATCGC CTACGGCCAG GGCACCTCGG CCACGGCCCT GCAGATGGCG
TCGGTCTACG CGACCGTGGC GAACGGCGGC ATGCGGGTCG CGCCGCGGCT GGTGGACGCG
ATCACCGGCC CGGACGGGGT CACACGGCCC ACCCCGCGGG CGCCCGAGCG CCGGGTGGTC
TCCCCGGAGA CCGCCTCCAC GCTCACCCGC ATGCTCGAGG CCGTCGCGAC GACACAGGGC
ACCGCCCCCG CCGCCGAGGT CGCCGGGTAC CGGGTCGCCG GCAAGACGGG CACGGCGAAG
CGGTACGACC CGGTGAACGG CGGCTACGAC GGCTACGTCT CGACGTTCAT CGGCTTCGCC
CCGGCCGACG ACCCCCAGGT CGTCGTGGAG GTCGTGCTCG ACCACCCGCG CAAGGGCTTC
TACGGCGGCG AGGTCGCCGC GCCCGTGTTC AAGCGGGTGA TGAGCTTCGC CCTCACCACG
CTGGGTGTGC CGCCGCCGGG GACGAGACCC GAACCGCTGG TCCTCGACCT CGACCACTGA
|
|---|
| Protein sequence | MSQTTRGPSS GRGRNRLRLV TNPHPGSPDS RSARHDGDDL LDPSVRRFSG RDPDGGRGRM
TPPPRGGDRH GDDRRGYDAA RPRNDRRQDA RRRDDRDDRD DRDDRDDRDD RDDRDDRDDR
DELDEQTWDD AAAEATERAA RRPRPRPAAA GRERRAATAR AGRSSPRVSP LRSAAAGSAT
PREQLRRDQA ARATSARTTS ARGAAGRRNP TRGAASRTTS GRIPPVRRPH PSSGGAGRNR
ATSIRRGLGG APPRPPRPFV LASPRRRVRV SVVLMIAVLV VIAGRLAQLQ GFASSNYAEQ
AEQQRLRKSV LPADRGMITD RHGDALAQDV ERRAVYADPW LMNEAQVVDA ARKLAPLLGE
SENTLRKSMT SNDPKVRFVY LGRRLDRAVG DEVDKLGLRG IGVLPERGRW YPSLTLGANF
VGFTKLGEND AIVGAGGLEL AYDSVLRGTD GRRQIEADPS GREIPSAQSV EKDPVSGSTL
RLTIDNYIQW DAQSAIAEAV RTSEADGGTI VVMNPKTGDL LAMADAPQFD PNNITSRDID
AIGNRSTGQA FEPGSVNKVI TMAAALDRNL IETTTPITVP PSIERGGVTI TDSEPHGTEH
LTAAGVLARS SNIGTVLVAE RVGNDNLEQM MRAFGLGKAT EVDFPGETAG ILPPAADWSG
SQAATIAYGQ GTSATALQMA SVYATVANGG MRVAPRLVDA ITGPDGVTRP TPRAPERRVV
SPETASTLTR MLEAVATTQG TAPAAEVAGY RVAGKTGTAK RYDPVNGGYD GYVSTFIGFA
PADDPQVVVE VVLDHPRKGF YGGEVAAPVF KRVMSFALTT LGVPPPGTRP EPLVLDLDH
|
|---|
| |