| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5103 |
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| Symbol | |
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| ID | 5673438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6108859 |
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| End bp | 6110400 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641243954 |
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| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
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| Protein accession | YP_001509368 |
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| Protein GI | 158316860 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00121177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0610764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACCC CGGCACTACG TCCGGCAGCG CCGTCACCGC GGTCGCTCAC CGCTCTGCCC
GACGTCCTCA GATCCATCAC CGTCGCGCCC GGTCCGTCGG GCGGGGCGGC CCTCGCCGGT
GTCGTCCTCA CCGGCGTCAC CCACGACTCG CGCGCGGTGC TGCCGGGCGA CCTCTACGCG
GCGCTGCCCG GCGCGCACGT GCACGGTGCC GACTTCGCGG CCGGCGCGGT CGCCGCCGGC
GCCGTCGCCG TCCTCACCGA CCCGGTGGGC GCCGCGGCGC TGTCCGGCCG GCTCGCGGTG
CCCGTGCTCG TCACCGACGA CCCGCGCCGC GACCTGGCGC CGGCCGCCGC CTGGATCTAC
GGCGACCCGT CGAGCGCGCT GACCCTGCTC GGGGTCACCG GCACGAACGG CAAGACCACC
ACCGCCTTCC TCCTGGACGC CGGCCTGCGC GCCGCCGGGT ACACCACGGG CCTGCTCGGC
ACGGTGCAGA CCCGGGTCGC CGGAACGGTG GTGCCCTCGG TGCGCACGAC GCCCGAGTCC
GGCGACCTGC AGGCGCTGCT CGCGACGATG GTGGAGCGGG GCGTCGGGGC GGCGTCGATG
GAGGTGTCGA GCCACGCGCT GGCCCAGCAC CGGGTGGACG CGCTGCGCTT CGCCGGCGCC
GCCTTCACCA ACCTCAGCCA GGACCACCTC GACTTCCACC CGACGATGGA GGACTACTTC
GCGGCGAAGG CGGCACTGTT CGAGCCCGCC CGCAGCGCGG CCGCCGTGGT CTGCGTCGAC
GACGACTGGG GCCGCCGGCT CGCGGCGCTG CGCCCGGACG CGCGCACCTA CTCGGTGACC
GGCCGCCCGG CCGACTGGTG GCCGGAGGAC GTCGTCGCCG GGCCGGGCGG CAGCGTGTTC
CGCGCGCTGG GCCCGGACGG CGCGAAGGCG GACCTCTCGC TCGCCCTGCC GGGCCGGTTC
AACGTCGCCA ACGCGCTGGG CGCCCTCGCG CTGCTGGCCG CTGTCGGTGT TCCGCTGGAG
GCGGCGGCCG AGGGCATCTC GTCGCTGCCG GGGGTCCCGG GCCGGATGGA GCGGATCGAC
GCCGGCCAGC CGTTCCTCGC CCTCGTCGAC TACGCCCACA CCCCCGGCGC GGTCGAGACG
CTGCTCGCCA CCGTGCGCCC GATCGTGACC GGGCGGGTGG TCGTCGTCCT CGGCTGCGGT
GGGGACCGCG ACCGCGCCAA ACGGCCGCTG ATGGGCGCGG CCGCGGCGCG GCTGGCCGAC
CTGGCGGTGT TCACCAGTGA CAACCCCCGG TCCGAGGACC CGGCGCGCAT CCTCGAGCAG
ATGCTGGCCG GTGCCCGCGG CGCCCCCGGA GCGGGCGAGA TCGTTGTGGA GCCGGACCGG
GCGAGCGCGA TCGCGCTCGC GGTCGGCGCC GCCGGGCCCA CCGACGCCGT GATCGTGGCC
GGAAAGGGGC ACGAGAGCGG GCAGGACGTC GCCGGTGTCG TCACGCCGTT CGACGACCGC
GAGGTGCTGC GCTCCGCGCT GCTGGCGGCG GCGAGCCGAT GA
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| Protein sequence | MTTPALRPAA PSPRSLTALP DVLRSITVAP GPSGGAALAG VVLTGVTHDS RAVLPGDLYA
ALPGAHVHGA DFAAGAVAAG AVAVLTDPVG AAALSGRLAV PVLVTDDPRR DLAPAAAWIY
GDPSSALTLL GVTGTNGKTT TAFLLDAGLR AAGYTTGLLG TVQTRVAGTV VPSVRTTPES
GDLQALLATM VERGVGAASM EVSSHALAQH RVDALRFAGA AFTNLSQDHL DFHPTMEDYF
AAKAALFEPA RSAAAVVCVD DDWGRRLAAL RPDARTYSVT GRPADWWPED VVAGPGGSVF
RALGPDGAKA DLSLALPGRF NVANALGALA LLAAVGVPLE AAAEGISSLP GVPGRMERID
AGQPFLALVD YAHTPGAVET LLATVRPIVT GRVVVVLGCG GDRDRAKRPL MGAAAARLAD
LAVFTSDNPR SEDPARILEQ MLAGARGAPG AGEIVVEPDR ASAIALAVGA AGPTDAVIVA
GKGHESGQDV AGVVTPFDDR EVLRSALLAA ASR
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