| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5095 |
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| Symbol | |
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| ID | 5673430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6097951 |
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| End bp | 6099600 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 641243946 |
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| Product | UDP-N-acetylmuramate--alanine ligase |
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| Protein accession | YP_001509360 |
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| Protein GI | 158316852 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.279001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.025809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGGAC CGCACTCCGA CGACGCCCCG GCCGCCCCAG CAGGCCCGGC CGCCGCGCCG
CCGCCCGTCG TCCCCGATCC CCGCGACCGC CCCGAGCGGG CCCGGCGGGT CCACTTCCTC
GGCATCGGCG GCGCCGGGCT GTCACCCCTC GCCCAGATCC ACCTGGCCGC CGGCGGCCAG
GTCTCCGGCA GCGACCAGGA GTACTCACCG CGGGTCGCCA TGCTGCGTGA GCTGGGGGTC
CCCGTCCGGG TCGGCCCCGC TGCCGACGCG GCGGCGCTGG CCGCCGAGCT GTCCGCGGCG
GACGTCGTCG TGGCCTCCAG CGCGCTGCGT GACGACCACC CGGAGATCAT CGCCGCCCGC
GAGCTCGGCG TCCCCGTCCG GCGGCGCTCG GACTGGCTGC CGGAGCTGAC CGCGCCCTAC
CGGCTCGTGG CGGTCGCCGG CTCACACGGC AAGACCACCA CCGCGGCGAT GCTGACCCTG
GTGCTCGCGG CCGGCGGCGC CGACCCGACC GCGGTCATCG GTGCCGATGT GGCCCAGTTG
GGCGGCAGCG CCGTGACCGG ACGGGGCGAC GTGTTCGTCC TGGAGGCGGA TGAGTACGGC
GGCGCGTTCG CCGGGCTGGA CCCGGAGCTC GCGGTGATCA CCAACGTCGA ATGGGAGCAT
CCGGACCTCT TCCCGGACGA GGCCTCGGTG CGCGCGGTGT TCGCCGACTT CGCGGCCCGG
GTCCGCCCGG GCGGGCGGCT GGTCGTCTGC GGCGACCATC CCGGCGTCGC CGCGGTGCTC
GCAGAACTCG ACCGGCGGGC CGAGCCCGAC CGGCGCGCCG ACGCGCCGCG GGCCCGGGTG
GTCGACTACG GCTTCGCCCC CGGGCGGACG TGGCGGGCGG TGGACTACGT CCCGCTGCCC
GGCGGCGGCT CCACCTCGAC CGTGCTGCAC GACGGGAACC GGGTCGGCGA GCTCACCCTG
GCGCTGCCCG GCCCCCACAT CGCCCTGGAC GCCCTCGCCG CCCTCGCCAC GGCCGCCGAG
CTGGGGGTGC CGCCCACGGA CGCCCTGAGG ACGCTGGGGA CGTACGCGGG CGCGGCCCGG
CGCTTCGACG TCGTGGGCCG GGCGAGCGCG CCCGGCGGCA CCCGCGTGGA GATCGTCGAC
GACTACGCGC ACCACCCGAC CGAGATCCGC GCCACCCTGC GCGCGGCCCG CGACCGCGCC
GCCGGCCGGC AGGTCTGGGC GGTCGCGCAG CCGCACACGT TCAGTCGCCT CGCCGCGCTG
CTCGACGACT TCGCGACGGC CTTCGGCGAC GCCGACCGCG TCTACGTGAC CGACGTGTAC
GCCGCGCGCG AGACCGACAA CCTGGGCCTG CACGCGTCCG ACCTCGCCGG GCGGATCAGG
CGGCCGGCCG CCGCCGGCTA CGTGGCCTGG CCCGACCTGC CGGGCCGGCT CGTCGCCGAC
CTCGCCGACC TCGGCGGCCG CGGCGGCCGC GGGGACCTCG GCGACGCGGC GGCCGGCGGC
ACGCACGGCG TCATGCTGCT CACCCTCGGC GCCGGAACGA TCACCACGCT CGGCCCGCGC
CTGCTGGACC TGCTCACCGC CGGCGGCACC GCCGCACTTT CCGGGAGCAG CCGGGCGGGC
GACCAGGACG CGACGGGCCT GCCGACCTGA
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| Protein sequence | MTGPHSDDAP AAPAGPAAAP PPVVPDPRDR PERARRVHFL GIGGAGLSPL AQIHLAAGGQ
VSGSDQEYSP RVAMLRELGV PVRVGPAADA AALAAELSAA DVVVASSALR DDHPEIIAAR
ELGVPVRRRS DWLPELTAPY RLVAVAGSHG KTTTAAMLTL VLAAGGADPT AVIGADVAQL
GGSAVTGRGD VFVLEADEYG GAFAGLDPEL AVITNVEWEH PDLFPDEASV RAVFADFAAR
VRPGGRLVVC GDHPGVAAVL AELDRRAEPD RRADAPRARV VDYGFAPGRT WRAVDYVPLP
GGGSTSTVLH DGNRVGELTL ALPGPHIALD ALAALATAAE LGVPPTDALR TLGTYAGAAR
RFDVVGRASA PGGTRVEIVD DYAHHPTEIR ATLRAARDRA AGRQVWAVAQ PHTFSRLAAL
LDDFATAFGD ADRVYVTDVY AARETDNLGL HASDLAGRIR RPAAAGYVAW PDLPGRLVAD
LADLGGRGGR GDLGDAAAGG THGVMLLTLG AGTITTLGPR LLDLLTAGGT AALSGSSRAG
DQDATGLPT
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