Gene Franean1_5089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5089 
Symbol 
ID5673424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6092303 
End bp6093355 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content77% 
IMG OID641243940 
ProductDivIVA family protein 
Protein accessionYP_001509354 
Protein GI158316846 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG3599] Cell division initiation protein 
TIGRFAM ID[TIGR03544] DivIVA domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.322481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000812567 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCGCTGA CACCGCAGGA TGTTCAGAAC AAGGTCTTCA GCCCGACGAG GTTCCGCACG 
GGCTACAACG AGGACGAGGT CGACACCTTC CTTGATGAGG TCGAGGCCGA GCTGACGCGA
CTGCTCGACG AGAGCAGCGA CCTGCGCAGG CAGCTCGACG AGGCCCGCCG GTCCGGCGGT
GGCGGTCCCG GTGTCCCGGC ACAGATCCTC GACGAGAACC AGCAGCTGCG CCGCCAGCTC
GAGGAGTCCC GCCGGCAGCT GGCGCAGGCG CAGGCGCAGG CCGCGCAGGC GGCCCAGGCC
GCCCGCGAGC GGCCCCCGAT GCCCGCCGGC CCGCCTGGCG CGGGTCCGGG TGGTCCGGGT
GGACCTGGCG CGCCCGGTGG TCCGCCGGTG TCCGGTGGCC CGACGGCGGT CATGCCCGCG
CTGGTCGGCG GGGGCGGTCA GGCCCCGGCC CGCACGGGCC CGGGAGCCGG TGGCCAGAAC
GACGCCGACA TCGAGCAGCG CGTCGCGCGG ACCCTCGTGC TCGCCCAGCG GACCGCCGAC
GAGGCGCTGC GGGAGGCCCG CGCCGAGTCG GAGCGGGCCC GCCGCGAGGC GCGCGCCGAC
GCCGACCGGA TCCTCGGTGA GGCCCGGGCG CACGTCGCCG AGCAGCTCGG TGGGCTCGAG
GACGACAAGC GCCGCCTCGA AGGCCAGGTC GAGCAGCTCC GCGCCTTCGA GCGTGAGTAC
CGCACGCGGC TGCGCGCCTA CCTGGAGATG CAGCTGCGTG ACCTCGACGG CATGCCCACA
CAGCCGGCCG TCGGGCCGGG TATGCCGTCG CGCCCCGGGC TCAACCCCGG CGCGCCGACA
CCCACCCCGG CCCCCGCGAG TGTCGGCATG GCGCAGACCG GTGGCGGCCA GCCGCCCCAG
CCGCCCCAGC AGCCCCAGCA CGTGGGAGCG CAGGCGTTCC AGGGCGGCCC GCAGATGGGC
GCCGCGACGC TGGCGCGGGA GAGCAACGGC CACGGCGGGC GCCCGGATCT CGACCCGGGC
CGCCGCGACG CTCCGGGCAT GCAGGAGTTC TAG
 
Protein sequence
MALTPQDVQN KVFSPTRFRT GYNEDEVDTF LDEVEAELTR LLDESSDLRR QLDEARRSGG 
GGPGVPAQIL DENQQLRRQL EESRRQLAQA QAQAAQAAQA ARERPPMPAG PPGAGPGGPG
GPGAPGGPPV SGGPTAVMPA LVGGGGQAPA RTGPGAGGQN DADIEQRVAR TLVLAQRTAD
EALREARAES ERARREARAD ADRILGEARA HVAEQLGGLE DDKRRLEGQV EQLRAFEREY
RTRLRAYLEM QLRDLDGMPT QPAVGPGMPS RPGLNPGAPT PTPAPASVGM AQTGGGQPPQ
PPQQPQHVGA QAFQGGPQMG AATLARESNG HGGRPDLDPG RRDAPGMQEF