Gene Franean1_5064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5064 
Symbol 
ID5673400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6062728 
End bp6063417 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content71% 
IMG OID641243915 
Productpeptidase M50 
Protein accessionYP_001509330 
Protein GI158316822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0650927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0347962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGTTTC ACCTCGCCGA GCCCGCGGCG CTGCTCGGGA TCGTGCTCGC CTTCGTCATC 
GGCATCGTCG TCCACGACGG TGCGCAGATC CTCGCGGCCC GGCTGGCCCG TGACCCGATC
CCGAGGCGCT CCGGGCGGCT GACCGCCGGG GTGGGCACCC AGCGGATCAG CCCGTTCAGC
TGGGTCGGCG TGCTCATCGG CGGTGCCGGG TGGGCGGAGC CGATCCGGAT GAACGACGTC
TGGCGCAAGC GCCGTTTCCA CGTGGCCGCT GCCCTGCTCG CGGGCCCGCT CTCCTACGCG
CTGCTCGCGC TCGCGTCGCT CGCCGGCGCA CGCGCGCTCA CGCAGCGTGC AGTGATCGAC
ACTGGGGACC GTGCGGCCGA GATCGTCGGC GGCACCTTCT CGGTGGAGCT GCTGCTGTGG
ATGGCGATCA CCTTCGGGTC GTTGTGCATC CTCAGCCTCG TCCCGGTGCC GCCGACGGAC
GGCGGGCGCA TCCTGTTCCT ACTCGGCCCG CAGTCCGAGG GCTGGCGCAA GGCGAACTAC
CGGCTCACCG AGGGCAACGT CGGGGTGGTG ATCCTCCTCG CGGTGATCAT CCTGCCGGTG
CTGTTCCCCG GGTTCCCGTC GGTGATCGGT CAGCTGATCT GGCCGCTCAT CCGCGGCCTG
GGCTCCCTGA TCGGGATCGA TCTGCCGTAG
 
Protein sequence
MLFHLAEPAA LLGIVLAFVI GIVVHDGAQI LAARLARDPI PRRSGRLTAG VGTQRISPFS 
WVGVLIGGAG WAEPIRMNDV WRKRRFHVAA ALLAGPLSYA LLALASLAGA RALTQRAVID
TGDRAAEIVG GTFSVELLLW MAITFGSLCI LSLVPVPPTD GGRILFLLGP QSEGWRKANY
RLTEGNVGVV ILLAVIILPV LFPGFPSVIG QLIWPLIRGL GSLIGIDLP