Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5064 |
Symbol | |
ID | 5673400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6062728 |
End bp | 6063417 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641243915 |
Product | peptidase M50 |
Protein accession | YP_001509330 |
Protein GI | 158316822 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0650927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0347962 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGTTTC ACCTCGCCGA GCCCGCGGCG CTGCTCGGGA TCGTGCTCGC CTTCGTCATC GGCATCGTCG TCCACGACGG TGCGCAGATC CTCGCGGCCC GGCTGGCCCG TGACCCGATC CCGAGGCGCT CCGGGCGGCT GACCGCCGGG GTGGGCACCC AGCGGATCAG CCCGTTCAGC TGGGTCGGCG TGCTCATCGG CGGTGCCGGG TGGGCGGAGC CGATCCGGAT GAACGACGTC TGGCGCAAGC GCCGTTTCCA CGTGGCCGCT GCCCTGCTCG CGGGCCCGCT CTCCTACGCG CTGCTCGCGC TCGCGTCGCT CGCCGGCGCA CGCGCGCTCA CGCAGCGTGC AGTGATCGAC ACTGGGGACC GTGCGGCCGA GATCGTCGGC GGCACCTTCT CGGTGGAGCT GCTGCTGTGG ATGGCGATCA CCTTCGGGTC GTTGTGCATC CTCAGCCTCG TCCCGGTGCC GCCGACGGAC GGCGGGCGCA TCCTGTTCCT ACTCGGCCCG CAGTCCGAGG GCTGGCGCAA GGCGAACTAC CGGCTCACCG AGGGCAACGT CGGGGTGGTG ATCCTCCTCG CGGTGATCAT CCTGCCGGTG CTGTTCCCCG GGTTCCCGTC GGTGATCGGT CAGCTGATCT GGCCGCTCAT CCGCGGCCTG GGCTCCCTGA TCGGGATCGA TCTGCCGTAG
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Protein sequence | MLFHLAEPAA LLGIVLAFVI GIVVHDGAQI LAARLARDPI PRRSGRLTAG VGTQRISPFS WVGVLIGGAG WAEPIRMNDV WRKRRFHVAA ALLAGPLSYA LLALASLAGA RALTQRAVID TGDRAAEIVG GTFSVELLLW MAITFGSLCI LSLVPVPPTD GGRILFLLGP QSEGWRKANY RLTEGNVGVV ILLAVIILPV LFPGFPSVIG QLIWPLIRGL GSLIGIDLP
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