| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5059 |
|---|
| Symbol | |
|---|
| ID | 5673395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 6057846 |
|---|
| End bp | 6058523 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641243910 |
|---|
| Product | cytidylate kinase |
|---|
| Protein accession | YP_001509325 |
|---|
| Protein GI | 158316817 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0283] Cytidylate kinase |
|---|
| TIGRFAM ID | [TIGR00017] cytidylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0373389 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0397379 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCGCGG TGGACGGCCC GGGCGGCTCC GGGAAGAGCA CCGTCTCCCG GGAGATCGCG
CGCCGGCTCG GCCTGCGCTA CCTGGACACC GGGGCGATGT ACCGGGCGGT CACCCAGGTC
GCCCTGGAGC GCCGCATCGA CATCGAGGAC CCGGCCGCGG TGGCCGAGGT CGTCGAGCGC
ACCGTCCTCA CGGTCGGCAC GGATCCCGAC CGCCCGTCGA TCTCCGTCGA CGGGGTGAAC
GTCGACGAGC AGATCCGCAC CCGGGCGGTG ACGAACGCCG TGAGCGCGGT CGCCGCCGTG
CCCGCCGTGC GGGCCCGGAT GGTCACGCAG CAGCGCGAGA TCATCGCCGA GGCCCTCGCC
GCCGGCGGCA TCGTGGTCGA GGGCCGCGAC ATCGGCTCGG TCGTCGCGCC GGACGCCCCG
GTCAAGGTCT TCCTCACCGC GTCCACCGAG GTGCGCGCGC TGCGGCGGTC CCGGCAGCTG
GGGGAGAAGG GCGTCGACGA CGTGGCCCGC ACCCTGGCCG AGCTCGACCG CCGTGACGCC
CTCGACAGCT CGCGCACGGT CGACCCGCTG TCCATTCCCG CGGGCGCGAT CGTCCTCGAC
TCCAGCGCGC TGTCGGTCCC CGAGGTGGTG GACGAGGTCC TGCGCCAGGG CGAGCACGTG
CTCGTTACGA CCTCATGA
|
|---|
| Protein sequence | MVAVDGPGGS GKSTVSREIA RRLGLRYLDT GAMYRAVTQV ALERRIDIED PAAVAEVVER
TVLTVGTDPD RPSISVDGVN VDEQIRTRAV TNAVSAVAAV PAVRARMVTQ QREIIAEALA
AGGIVVEGRD IGSVVAPDAP VKVFLTASTE VRALRRSRQL GEKGVDDVAR TLAELDRRDA
LDSSRTVDPL SIPAGAIVLD SSALSVPEVV DEVLRQGEHV LVTTS
|
|---|
| |